PROTEIN: RavehSadkaT_2016_SRR6257474_bin.5_k119_960_114
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Protein File & Metadata
Source:
RavehSadkaT_2016_SRR6257474_bin.5_k119_960_114.pdb
Genome ID:
Protein ID:
RavehSadkaT_2016_SRR6257474_bin.5_k119_960_114
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Protein Sequence
MDANALVPLE EYIDNYPNIK NYLSENEWNK LKDEDGHIYL IPQFCVVNGE NKKTNHNGEA 60 FWIQKEVLKW DNYPNIKTID EYFDLIERYK DAHPTINGEE TIGFQILTYD WRMFCLENPP 120 QFLAGYPNDG GAIVNPDTLE AKIYSDIPEA KMYFKKLNEV YNKGLIESET FTLSYNQYLE 180 KLSTGAGLGM VEQYWQFESS DIELLQKGLN NRRWIPLALT IDESVTPNYY NYMVVNSSRG 240 IGITKSCEDI DGAMKVINDL LDPEILILRN WGEEGIDYMV DDNGEFYRTE EQRENSLDNK 300 WVLNNMCYYQ YLPMYKGMLD DGINAVVPWE QSREFYENLG SNDRELLEAY GYETFNEFIP 360 KVNDKISEWY PIYSYSNNLF TDSAAGIAKE KMTEIKRKFL PKIIMGRIDQ FESNWNDYIY 420 ELRNNVDIYM KRLLLMKLKE E 441
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133D019-F1-model_v4 | 1 | 441 | 106 | 485 | 0.6319 |
0.775 |
| AF-A0A133CZN8-F1-model_v4 | 1 | 441 | 104 | 501 | 0.6317 |
0.7569 |
| AF-Q8DNU2-F1-model_v4 | 1 | 436 | 112 | 445 | 0.5801 |
0.7674 |
| AF-K0F002-F1-model_v4 | 1 | 432 | 121 | 439 | 0.5393 |
0.7382 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 1 | 441 | 118 | 505 | 0.6732 |
0.8254 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 1 | 441 | 118 | 505 | 0.6732 |
0.8254 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6fth-assembly1.cif.gz_A | 1 | 441 | 72 | 495 | 0.7025 |
0.7898 |
| 5xs8-assembly1.cif.gz_A | 1 | 438 | 69 | 474 | 0.7007 |
0.8032 |
| 3omb-assembly1.cif.gz_A | 1 | 441 | 75 | 503 | 0.6945 |
0.7777 |
| 5g62-assembly2.cif.gz_B | 1 | 441 | 70 | 487 | 0.6922 |
0.7856 |
| 5h6u-assembly1.cif.gz_A | 1 | 441 | 77 | 486 | 0.6763 |
0.7773 |
| 3vlw-assembly2.cif.gz_B | 1 | 441 | 79 | 488 | 0.674 |
0.7762 |
| 4tqu-assembly1.cif.gz_Q | 1 | 441 | 80 | 489 | 0.6734 |
0.7775 |
| 6jhx-assembly2.cif.gz_B | 1 | 440 | 80 | 483 | 0.6731 |
0.782 |
| 5g5y-assembly1.cif.gz_A | 1 | 441 | 69 | 490 | 0.6647 |
0.7522 |
| 5suo-assembly1.cif.gz_A | 1 | 441 | 70 | 450 | 0.6535 |
0.7756 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P37966-F1-model_v4 | 1 | 441 | 104 | 502 | 0.658 |
0.7857 |
| AF-A0A0H2URD6-F1-model_v4 | 1 | 441 | 116 | 535 | 0.6521 |
0.7661 |
| AF-Q795R2-F1-model_v4 | 1 | 441 | 105 | 498 | 0.6095 |
0.7342 |
| AF-A0A0H2UMY0-F1-model_v4 | 1 | 441 | 110 | 490 | 0.5928 |
0.7307 |
| AF-Q2YKZ9-F1-model_v4 | 1 | 433 | 96 | 411 | 0.5896 |
0.7919 |
| AF-Q578M8-F1-model_v4 | 1 | 433 | 96 | 411 | 0.5895 |
0.7919 |
| AF-Q8FVS7-F1-model_v4 | 1 | 433 | 96 | 411 | 0.5894 |
0.7917 |
| AF-Q7LYW7-F1-model_v4 | 1 | 436 | 117 | 450 | 0.5752 |
0.764 |
| AF-Q8FW10-F1-model_v4 | 1 | 436 | 97 | 433 | 0.5656 |
0.7335 |
| AF-O50499-F1-model_v4 | 1 | 439 | 105 | 469 | 0.5587 |
0.6998 |