Cluster: PUL0788
🧬 Cluster Details
- Gene Count: 26
- CAZyme Count: 8
- Substrate: pectin
- Genome ID: PUL0788
- CGC Family ID: CGCFAM_02939
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| NULL(UNKNOWN) | NZ_CP012938 | Bovatus_RS25580 | 1 | 276 | - | NULL(UNKNOWN) |
| pfam | NZ_CP012938 | Bovatus_RS25045 | 1 | 101 | - | DUF3791 |
| pfam | NZ_CP012938 | Bovatus_RS21685 | 273 | 521 | - | DUF3791 |
| TC | NZ_CP012938 | Bovatus_RS21690 | 682 | 2286 | - | 8.A.46.1.3 |
| TC | NZ_CP012938 | Bovatus_RS21695 | 2306 | 5437 | - | 1.B.14.6.1 |
| pfam | NZ_CP012938 | Bovatus_RS21700 | 5649 | 6527 | - | SASA |
| CAZyme | NZ_CP012938 | Bovatus_RS21705 | 6660 | 9623 | - | GH2 |
| TF | NZ_CP012938 | Bovatus_RS21710 | 9823 | 14160 | - | HTH_AraC |
| CAZyme | NZ_CP012938 | Bovatus_RS21715 | 14298 | 16199 | - | PL11 |
| CAZyme | NZ_CP012938 | Bovatus_RS21720 | 16420 | 17883 | + | GH28 |
| CAZyme | NZ_CP012938 | Bovatus_RS21725 | 18396 | 19940 | + | PL9_1 |
| NULL(UNKNOWN) | NZ_CP012938 | Bovatus_RS21730 | 19987 | 20421 | + | NULL(UNKNOWN) |
| CAZyme | NZ_CP012938 | Bovatus_RS21740 | 20715 | 22025 | + | GH28 |
| CAZyme | NZ_CP012938 | Bovatus_RS21745 | 22328 | 24757 | + | CE20 | GH105 |
| CAZyme | NZ_CP012938 | Bovatus_RS21750 | 24931 | 26622 | + | PL1_2 |
| pfam | NZ_CP012938 | Bovatus_RS21755 | 26649 | 28922 | + | Fasciclin |
| TC | NZ_CP012938 | Bovatus_RS21760 | 28935 | 32201 | + | 1.B.14.6.1 |
| pfam | NZ_CP012938 | Bovatus_RS21765 | 32215 | 33762 | + | SusD_RagB | SusD-like_3 |
| pfam | NZ_CP012938 | Bovatus_RS21770 | 33779 | 35512 | + | Fasciclin | Fasciclin | DUF5108 |
| NULL(UNKNOWN) | NZ_CP012938 | Bovatus_RS21775 | 35520 | 37199 | + | NULL(UNKNOWN) |
| TC | NZ_CP012938 | Bovatus_RS21780 | 37220 | 40360 | + | 1.B.14.6.1 |
| pfam | NZ_CP012938 | Bovatus_RS21785 | 40363 | 42036 | + | SusD-like_3 |
| NULL(UNKNOWN) | NZ_CP012938 | Bovatus_RS21790 | 42160 | 44271 | + | NULL(UNKNOWN) |
| pfam | NZ_CP012938 | Bovatus_RS21795 | 44288 | 47551 | + | DUF4450 |
| CAZyme | NZ_CP012938 | Bovatus_RS21800 | 47587 | 48996 | + | GH28 |
| TF | NZ_CP012938 | Bovatus_RS21805 | 49029 | 49409 | + | GerE |
Gene ID: Bovatus_RS25580
Type: null
Location: 1 - 276 (-)
Type: null
Location: 1 - 276 (-)
Gene ID: Bovatus_RS25045
Type: pfam
Location: 1 - 101 (-)
Type: pfam
Location: 1 - 101 (-)
Gene ID: Bovatus_RS21685
Type: pfam
Location: 273 - 521 (-)
Type: pfam
Location: 273 - 521 (-)
Gene ID: Bovatus_RS21690
Type: TC
Location: 682 - 2286 (-)
Type: TC
Location: 682 - 2286 (-)
Gene ID: Bovatus_RS21695
Type: TC
Location: 2306 - 5437 (-)
Type: TC
Location: 2306 - 5437 (-)
Gene ID: Bovatus_RS21700
Type: pfam
Location: 5649 - 6527 (-)
Type: pfam
Location: 5649 - 6527 (-)
Gene ID: Bovatus_RS21705
Type: CAZyme
Location: 6660 - 9623 (-)
Type: CAZyme
Location: 6660 - 9623 (-)
Gene ID: Bovatus_RS21710
Type: TF
Location: 9823 - 14160 (-)
Type: TF
Location: 9823 - 14160 (-)
Gene ID: Bovatus_RS21715
Type: CAZyme
Location: 14298 - 16199 (-)
Type: CAZyme
Location: 14298 - 16199 (-)
Gene ID: Bovatus_RS21720
Type: CAZyme
Location: 16420 - 17883 (+)
Type: CAZyme
Location: 16420 - 17883 (+)
Gene ID: Bovatus_RS21725
Type: CAZyme
Location: 18396 - 19940 (+)
Type: CAZyme
Location: 18396 - 19940 (+)
Gene ID: Bovatus_RS21730
Type: null
Location: 19987 - 20421 (+)
Type: null
Location: 19987 - 20421 (+)
Gene ID: Bovatus_RS21740
Type: CAZyme
Location: 20715 - 22025 (+)
Type: CAZyme
Location: 20715 - 22025 (+)
Gene ID: Bovatus_RS21745
Type: CAZyme
Location: 22328 - 24757 (+)
Type: CAZyme
Location: 22328 - 24757 (+)
Gene ID: Bovatus_RS21750
Type: CAZyme
Location: 24931 - 26622 (+)
Type: CAZyme
Location: 24931 - 26622 (+)
Gene ID: Bovatus_RS21755
Type: pfam
Location: 26649 - 28922 (+)
Type: pfam
Location: 26649 - 28922 (+)
Gene ID: Bovatus_RS21760
Type: TC
Location: 28935 - 32201 (+)
Type: TC
Location: 28935 - 32201 (+)
Gene ID: Bovatus_RS21765
Type: pfam
Location: 32215 - 33762 (+)
Type: pfam
Location: 32215 - 33762 (+)
Gene ID: Bovatus_RS21770
Type: pfam
Location: 33779 - 35512 (+)
Type: pfam
Location: 33779 - 35512 (+)
Gene ID: Bovatus_RS21775
Type: null
Location: 35520 - 37199 (+)
Type: null
Location: 35520 - 37199 (+)
Gene ID: Bovatus_RS21780
Type: TC
Location: 37220 - 40360 (+)
Type: TC
Location: 37220 - 40360 (+)
Gene ID: Bovatus_RS21785
Type: pfam
Location: 40363 - 42036 (+)
Type: pfam
Location: 40363 - 42036 (+)
Gene ID: Bovatus_RS21790
Type: null
Location: 42160 - 44271 (+)
Type: null
Location: 42160 - 44271 (+)
Gene ID: Bovatus_RS21795
Type: pfam
Location: 44288 - 47551 (+)
Type: pfam
Location: 44288 - 47551 (+)
Gene ID: Bovatus_RS21800
Type: CAZyme
Location: 47587 - 48996 (+)
Type: CAZyme
Location: 47587 - 48996 (+)
Gene ID: Bovatus_RS21805
Type: TF
Location: 49029 - 49409 (+)
Type: TF
Location: 49029 - 49409 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides ovatus
Gene Composition
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