Cluster: PUL0787
🧬 Cluster Details
- Gene Count: 31
- CAZyme Count: 16
- Substrate: pectin
- Genome ID: PUL0787
- CGC Family ID: CGCFAM_00927
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | NZ_CP012938 | Bovatus_RS21500 | 1 | 2766 | - | GH106 |
| CAZyme | NZ_CP012938 | Bovatus_RS21505 | 2763 | 4166 | - | GH28 |
| pfam | NZ_CP012938 | Bovatus_RS21510 | 4163 | 4765 | - | DUF4450 |
| CAZyme | NZ_CP012938 | Bovatus_RS21515 | 4716 | 6251 | - | GH28 |
| CAZyme | NZ_CP012938 | Bovatus_RS21520 | 6300 | 7538 | - | CE12 |
| CAZyme | NZ_CP012938 | Bovatus_RS21525 | 7668 | 10544 | - | GH2 |
| CAZyme | NZ_CP012938 | Bovatus_RS21530 | 10787 | 13144 | + | GH43_18 | GH43_34 |
| CAZyme | NZ_CP012938 | Bovatus_RS21535 | 13176 | 15326 | + | GH42 |
| NULL(UNKNOWN) | NZ_CP012938 | Bovatus_RS21540 | 15365 | 15730 | + | NULL(UNKNOWN) |
| CAZyme | NZ_CP012938 | Bovatus_RS21545 | 15775 | 17160 | + | GH28 |
| pfam | NZ_CP012938 | Bovatus_RS21550 | 17249 | 17935 | + | Lipase_GDSL_2 | Lipase_GDSL_lke |
| pfam | NZ_CP012938 | Bovatus_RS21555 | 18037 | 20118 | - | SusD_RagB | SusD-like_3 |
| TC | NZ_CP012938 | Bovatus_RS21560 | 20143 | 23274 | - | 1.B.14.6.1 |
| pfam | NZ_CP012938 | Bovatus_RS21565 | 23778 | 24956 | - | Phage_int_SAM_5 | Arm-DNA-bind_5 |
| pfam | NZ_CP012938 | Bovatus_RS21570 | 25356 | 26369 | + | Mfa_like_1 |
| pfam | NZ_CP012938 | Bovatus_RS21575 | 26415 | 28040 | + | Mfa_like_1 |
| TC | NZ_CP012938 | Bovatus_RS21580 | 28100 | 31279 | + | 1.B.14.6.1 |
| pfam | NZ_CP012938 | Bovatus_RS21585 | 31301 | 33313 | + | SusD_RagB | SusD-like_3 |
| TC | NZ_CP012938 | Bovatus_RS21590 | 33360 | 36410 | + | 1.B.14.6.1 |
| pfam | NZ_CP012938 | Bovatus_RS21595 | 36432 | 38153 | + | SusD_RagB | SusD-like_3 |
| CAZyme | NZ_CP012938 | Bovatus_RS21600 | 38234 | 40318 | + | PL11_1 |
| CAZyme | NZ_CP012938 | Bovatus_RS21605 | 40500 | 43898 | + | PL26 |
| pfam | NZ_CP012938 | Bovatus_RS21610 | 43879 | 45639 | - | PDDEXK_9 | AAA-ATPase_like |
| CAZyme | NZ_CP012938 | Bovatus_RS21615 | 46352 | 47986 | - | CE12 | CE12 |
| CAZyme | NZ_CP012938 | Bovatus_RS21620 | 48116 | 49258 | - | GH105 |
| CAZyme | NZ_CP012938 | Bovatus_RS21625 | 49503 | 51344 | + | PL11_1 |
| CAZyme | NZ_CP012938 | Bovatus_RS21630 | 51348 | 52757 | + | GH105 |
| pfam | NZ_CP012938 | Bovatus_RS21635 | 52776 | 53090 | + | rhaM |
| TF | NZ_CP012938 | Bovatus_RS21640 | 53181 | 57464 | + | HTH_AraC | HTH_AraC |
| CAZyme | NZ_CP012938 | Bovatus_RS21645 | 57631 | 58599 | + | CE4 |
| CAZyme | NZ_CP012938 | Bovatus_RS21650 | 58613 | 59743 | + | GH105 |
Gene ID: Bovatus_RS21500
Type: CAZyme
Location: 1 - 2766 (-)
Type: CAZyme
Location: 1 - 2766 (-)
Gene ID: Bovatus_RS21505
Type: CAZyme
Location: 2763 - 4166 (-)
Type: CAZyme
Location: 2763 - 4166 (-)
Gene ID: Bovatus_RS21510
Type: pfam
Location: 4163 - 4765 (-)
Type: pfam
Location: 4163 - 4765 (-)
Gene ID: Bovatus_RS21515
Type: CAZyme
Location: 4716 - 6251 (-)
Type: CAZyme
Location: 4716 - 6251 (-)
Gene ID: Bovatus_RS21520
Type: CAZyme
Location: 6300 - 7538 (-)
Type: CAZyme
Location: 6300 - 7538 (-)
Gene ID: Bovatus_RS21525
Type: CAZyme
Location: 7668 - 10544 (-)
Type: CAZyme
Location: 7668 - 10544 (-)
Gene ID: Bovatus_RS21530
Type: CAZyme
Location: 10787 - 13144 (+)
Type: CAZyme
Location: 10787 - 13144 (+)
Gene ID: Bovatus_RS21535
Type: CAZyme
Location: 13176 - 15326 (+)
Type: CAZyme
Location: 13176 - 15326 (+)
Gene ID: Bovatus_RS21540
Type: null
Location: 15365 - 15730 (+)
Type: null
Location: 15365 - 15730 (+)
Gene ID: Bovatus_RS21545
Type: CAZyme
Location: 15775 - 17160 (+)
Type: CAZyme
Location: 15775 - 17160 (+)
Gene ID: Bovatus_RS21550
Type: pfam
Location: 17249 - 17935 (+)
Type: pfam
Location: 17249 - 17935 (+)
Gene ID: Bovatus_RS21555
Type: pfam
Location: 18037 - 20118 (-)
Type: pfam
Location: 18037 - 20118 (-)
Gene ID: Bovatus_RS21560
Type: TC
Location: 20143 - 23274 (-)
Type: TC
Location: 20143 - 23274 (-)
Gene ID: Bovatus_RS21565
Type: pfam
Location: 23778 - 24956 (-)
Type: pfam
Location: 23778 - 24956 (-)
Gene ID: Bovatus_RS21570
Type: pfam
Location: 25356 - 26369 (+)
Type: pfam
Location: 25356 - 26369 (+)
Gene ID: Bovatus_RS21575
Type: pfam
Location: 26415 - 28040 (+)
Type: pfam
Location: 26415 - 28040 (+)
Gene ID: Bovatus_RS21580
Type: TC
Location: 28100 - 31279 (+)
Type: TC
Location: 28100 - 31279 (+)
Gene ID: Bovatus_RS21585
Type: pfam
Location: 31301 - 33313 (+)
Type: pfam
Location: 31301 - 33313 (+)
Gene ID: Bovatus_RS21590
Type: TC
Location: 33360 - 36410 (+)
Type: TC
Location: 33360 - 36410 (+)
Gene ID: Bovatus_RS21595
Type: pfam
Location: 36432 - 38153 (+)
Type: pfam
Location: 36432 - 38153 (+)
Gene ID: Bovatus_RS21600
Type: CAZyme
Location: 38234 - 40318 (+)
Type: CAZyme
Location: 38234 - 40318 (+)
Gene ID: Bovatus_RS21605
Type: CAZyme
Location: 40500 - 43898 (+)
Type: CAZyme
Location: 40500 - 43898 (+)
Gene ID: Bovatus_RS21610
Type: pfam
Location: 43879 - 45639 (-)
Type: pfam
Location: 43879 - 45639 (-)
Gene ID: Bovatus_RS21615
Type: CAZyme
Location: 46352 - 47986 (-)
Type: CAZyme
Location: 46352 - 47986 (-)
Gene ID: Bovatus_RS21620
Type: CAZyme
Location: 48116 - 49258 (-)
Type: CAZyme
Location: 48116 - 49258 (-)
Gene ID: Bovatus_RS21625
Type: CAZyme
Location: 49503 - 51344 (+)
Type: CAZyme
Location: 49503 - 51344 (+)
Gene ID: Bovatus_RS21630
Type: CAZyme
Location: 51348 - 52757 (+)
Type: CAZyme
Location: 51348 - 52757 (+)
Gene ID: Bovatus_RS21635
Type: pfam
Location: 52776 - 53090 (+)
Type: pfam
Location: 52776 - 53090 (+)
Gene ID: Bovatus_RS21640
Type: TF
Location: 53181 - 57464 (+)
Type: TF
Location: 53181 - 57464 (+)
Gene ID: Bovatus_RS21645
Type: CAZyme
Location: 57631 - 58599 (+)
Type: CAZyme
Location: 57631 - 58599 (+)
Gene ID: Bovatus_RS21650
Type: CAZyme
Location: 58613 - 59743 (+)
Type: CAZyme
Location: 58613 - 59743 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides ovatus
Gene Composition
Loading chart...
← Back to Cluster List