Cluster: PUL0770_HRGMv2_0429_C1
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate: pectin
- Genome ID: HRGMv2_0429
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| sulfatase | PUL0770_HRGMv2_0429_C1 | HRGMv2_0429_4_150 | 162242 | 163429 | + | S1_4 |
| TC | PUL0770_HRGMv2_0429_C1 | HRGMv2_0429_4_151 | 163538 | 165262 | + | 2.A.21.3.19 |
| STP | PUL0770_HRGMv2_0429_C1 | HRGMv2_0429_4_152 | 165370 | 166050 | + | NUDIX |
| pfam | PUL0770_HRGMv2_0429_C1 | HRGMv2_0429_4_153 | 166148 | 166849 | + | Aldolase_II |
| pfam | PUL0770_HRGMv2_0429_C1 | HRGMv2_0429_4_154 | 166933 | 168474 | + | AraA_N | Arabinose_Iso_C | AraA_central |
| pfam | PUL0770_HRGMv2_0429_C1 | HRGMv2_0429_4_155 | 168548 | 170140 | + | FGGY_N | FGGY_C |
| CAZyme | PUL0770_HRGMv2_0429_C1 | HRGMv2_0429_4_156 | 170330 | 171898 | + | GH51_1 |
| pfam | PUL0770_HRGMv2_0429_C1 | HRGMv2_0429_4_157 | 171998 | 174019 | + | Transketolase_N | Transket_pyr | Transketolase_C | Transketolase_C_1 |
Gene ID: HRGMv2_0429_4_150
Type: sulfatase
Location: 162242 - 163429 (+)
Type: sulfatase
Location: 162242 - 163429 (+)
Gene ID: HRGMv2_0429_4_151
Type: TC
Location: 163538 - 165262 (+)
Type: TC
Location: 163538 - 165262 (+)
Gene ID: HRGMv2_0429_4_152
Type: STP
Location: 165370 - 166050 (+)
Type: STP
Location: 165370 - 166050 (+)
Gene ID: HRGMv2_0429_4_153
Type: pfam
Location: 166148 - 166849 (+)
Type: pfam
Location: 166148 - 166849 (+)
Gene ID: HRGMv2_0429_4_154
Type: pfam
Location: 166933 - 168474 (+)
Type: pfam
Location: 166933 - 168474 (+)
Gene ID: HRGMv2_0429_4_155
Type: pfam
Location: 168548 - 170140 (+)
Type: pfam
Location: 168548 - 170140 (+)
Gene ID: HRGMv2_0429_4_156
Type: CAZyme
Location: 170330 - 171898 (+)
Type: CAZyme
Location: 170330 - 171898 (+)
Gene ID: HRGMv2_0429_4_157
Type: pfam
Location: 171998 - 174019 (+)
Type: pfam
Location: 171998 - 174019 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900548535
Gene Composition
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