Cluster: PUL0770_HRGMv2_0285_C10
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate: pectin
- Genome ID: HRGMv2_0285
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| pfam | PUL0770_HRGMv2_0285_C10 | HRGMv2_0285_34_10 | 5611 | 7632 | - | Transketolase_N | Transket_pyr | Transketolase_C | Transketolase_C_1 |
| CAZyme | PUL0770_HRGMv2_0285_C10 | HRGMv2_0285_34_11 | 7738 | 9306 | - | GH51_1 |
| pfam | PUL0770_HRGMv2_0285_C10 | HRGMv2_0285_34_12 | 9531 | 11123 | - | FGGY_N | FGGY_C |
| pfam | PUL0770_HRGMv2_0285_C10 | HRGMv2_0285_34_13 | 11139 | 12680 | - | AraA_N | Arabinose_Iso_C | AraA_central |
| pfam | PUL0770_HRGMv2_0285_C10 | HRGMv2_0285_34_14 | 12723 | 13424 | - | Aldolase_II |
| STP | PUL0770_HRGMv2_0285_C10 | HRGMv2_0285_34_15 | 13449 | 14129 | - | NUDIX |
| TC | PUL0770_HRGMv2_0285_C10 | HRGMv2_0285_34_16 | 14315 | 16039 | - | 2.A.21.3.19 |
| sulfatase | PUL0770_HRGMv2_0285_C10 | HRGMv2_0285_34_17 | 16107 | 17294 | - | S1_4 |
Gene ID: HRGMv2_0285_34_10
Type: pfam
Location: 5611 - 7632 (-)
Type: pfam
Location: 5611 - 7632 (-)
Gene ID: HRGMv2_0285_34_11
Type: CAZyme
Location: 7738 - 9306 (-)
Type: CAZyme
Location: 7738 - 9306 (-)
Gene ID: HRGMv2_0285_34_12
Type: pfam
Location: 9531 - 11123 (-)
Type: pfam
Location: 9531 - 11123 (-)
Gene ID: HRGMv2_0285_34_13
Type: pfam
Location: 11139 - 12680 (-)
Type: pfam
Location: 11139 - 12680 (-)
Gene ID: HRGMv2_0285_34_14
Type: pfam
Location: 12723 - 13424 (-)
Type: pfam
Location: 12723 - 13424 (-)
Gene ID: HRGMv2_0285_34_15
Type: STP
Location: 13449 - 14129 (-)
Type: STP
Location: 13449 - 14129 (-)
Gene ID: HRGMv2_0285_34_16
Type: TC
Location: 14315 - 16039 (-)
Type: TC
Location: 14315 - 16039 (-)
Gene ID: HRGMv2_0285_34_17
Type: sulfatase
Location: 16107 - 17294 (-)
Type: sulfatase
Location: 16107 - 17294 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp000436035
Gene Composition
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