Cluster: PUL0770_HRGMv2_0218_C4
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate: pectin
- Genome ID: HRGMv2_0218
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| pfam | PUL0770_HRGMv2_0218_C4 | HRGMv2_0218_28_2 | 614 | 2638 | - | Transketolase_N | Transket_pyr | Transketolase_C | Transketolase_C_1 |
| CAZyme | PUL0770_HRGMv2_0218_C4 | HRGMv2_0218_28_3 | 2799 | 4370 | - | GH51_1 |
| pfam | PUL0770_HRGMv2_0218_C4 | HRGMv2_0218_28_4 | 4482 | 6074 | - | FGGY_N | FGGY_C |
| pfam | PUL0770_HRGMv2_0218_C4 | HRGMv2_0218_28_5 | 6162 | 7703 | - | AraA_N | Arabinose_Iso_C | AraA_central |
| pfam | PUL0770_HRGMv2_0218_C4 | HRGMv2_0218_28_6 | 7782 | 8483 | - | Aldolase_II |
| STP | PUL0770_HRGMv2_0218_C4 | HRGMv2_0218_28_7 | 8559 | 9239 | - | NUDIX |
| TC | PUL0770_HRGMv2_0218_C4 | HRGMv2_0218_28_8 | 9494 | 11218 | - | 2.A.21.3.19 |
| sulfatase | PUL0770_HRGMv2_0218_C4 | HRGMv2_0218_28_9 | 11282 | 12469 | - | S1_22 |
Gene ID: HRGMv2_0218_28_2
Type: pfam
Location: 614 - 2638 (-)
Type: pfam
Location: 614 - 2638 (-)
Gene ID: HRGMv2_0218_28_3
Type: CAZyme
Location: 2799 - 4370 (-)
Type: CAZyme
Location: 2799 - 4370 (-)
Gene ID: HRGMv2_0218_28_4
Type: pfam
Location: 4482 - 6074 (-)
Type: pfam
Location: 4482 - 6074 (-)
Gene ID: HRGMv2_0218_28_5
Type: pfam
Location: 6162 - 7703 (-)
Type: pfam
Location: 6162 - 7703 (-)
Gene ID: HRGMv2_0218_28_6
Type: pfam
Location: 7782 - 8483 (-)
Type: pfam
Location: 7782 - 8483 (-)
Gene ID: HRGMv2_0218_28_7
Type: STP
Location: 8559 - 9239 (-)
Type: STP
Location: 8559 - 9239 (-)
Gene ID: HRGMv2_0218_28_8
Type: TC
Location: 9494 - 11218 (-)
Type: TC
Location: 9494 - 11218 (-)
Gene ID: HRGMv2_0218_28_9
Type: sulfatase
Location: 11282 - 12469 (-)
Type: sulfatase
Location: 11282 - 12469 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900767615
Gene Composition
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