Cluster: PUL0770_HRGMv2_0217_C6
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate: pectin
- Genome ID: HRGMv2_0217
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| sulfatase | PUL0770_HRGMv2_0217_C6 | HRGMv2_0217_121_8 | 9400 | 10587 | + | S1_4 |
| TC | PUL0770_HRGMv2_0217_C6 | HRGMv2_0217_121_9 | 10653 | 12377 | + | 2.A.21.3.19 |
| STP | PUL0770_HRGMv2_0217_C6 | HRGMv2_0217_121_10 | 12593 | 13273 | + | NUDIX |
| pfam | PUL0770_HRGMv2_0217_C6 | HRGMv2_0217_121_11 | 13404 | 14102 | + | Aldolase_II |
| pfam | PUL0770_HRGMv2_0217_C6 | HRGMv2_0217_121_12 | 14190 | 15731 | + | AraA_N | Arabinose_Iso_C | AraA_central |
| pfam | PUL0770_HRGMv2_0217_C6 | HRGMv2_0217_121_13 | 15752 | 17344 | + | FGGY_N | FGGY_C |
| CAZyme | PUL0770_HRGMv2_0217_C6 | HRGMv2_0217_121_14 | 17463 | 19034 | + | GH51_1 |
| pfam | PUL0770_HRGMv2_0217_C6 | HRGMv2_0217_121_15 | 19187 | 21208 | + | Transketolase_N | Transket_pyr | Transketolase_C | Transketolase_C_1 |
Gene ID: HRGMv2_0217_121_8
Type: sulfatase
Location: 9400 - 10587 (+)
Type: sulfatase
Location: 9400 - 10587 (+)
Gene ID: HRGMv2_0217_121_9
Type: TC
Location: 10653 - 12377 (+)
Type: TC
Location: 10653 - 12377 (+)
Gene ID: HRGMv2_0217_121_10
Type: STP
Location: 12593 - 13273 (+)
Type: STP
Location: 12593 - 13273 (+)
Gene ID: HRGMv2_0217_121_11
Type: pfam
Location: 13404 - 14102 (+)
Type: pfam
Location: 13404 - 14102 (+)
Gene ID: HRGMv2_0217_121_12
Type: pfam
Location: 14190 - 15731 (+)
Type: pfam
Location: 14190 - 15731 (+)
Gene ID: HRGMv2_0217_121_13
Type: pfam
Location: 15752 - 17344 (+)
Type: pfam
Location: 15752 - 17344 (+)
Gene ID: HRGMv2_0217_121_14
Type: CAZyme
Location: 17463 - 19034 (+)
Type: CAZyme
Location: 17463 - 19034 (+)
Gene ID: HRGMv2_0217_121_15
Type: pfam
Location: 19187 - 21208 (+)
Type: pfam
Location: 19187 - 21208 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900544825
Gene Composition
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