Cluster: PUL0745
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate: pectin
- Genome ID: PUL0745
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TF | NZ_CP012938 | Bovatus_RS00070 | 1 | 2745 | + | HTH_AraC |
| NULL(UNKNOWN) | NZ_CP012938 | Bovatus_RS00075 | 2974 | 3384 | + | NULL(UNKNOWN) |
| TF | NZ_CP012938 | Bovatus_RS00080 | 3386 | 3916 | + | GerE |
| TC | NZ_CP012938 | Bovatus_RS00085 | 4014 | 7172 | + | 1.B.14.6.1 |
| pfam | NZ_CP012938 | Bovatus_RS00090 | 7186 | 8940 | + | SusD_RagB | SusD-like_3 |
| pfam | NZ_CP012938 | Bovatus_RS00095 | 8959 | 10482 | + | Big_2 | Big_2 |
| NULL(UNKNOWN) | NZ_CP012938 | Bovatus_RS00100 | 10503 | 11861 | + | NULL(UNKNOWN) |
| CAZyme | NZ_CP012938 | Bovatus_RS00105 | 11946 | 13373 | + | GH30_2 |
| CAZyme | NZ_CP012938 | Bovatus_RS00110 | 13547 | 14935 | + | GH28 |
| CAZyme | NZ_CP012938 | Bovatus_RS00115 | 14980 | 16911 | + | GH146 |
| peptidase | NZ_CP012938 | Bovatus_RS00120 | 16927 | 18852 | + | S12.UPW |
| CAZyme | NZ_CP012938 | Bovatus_RS00125 | 18874 | 21141 | + | PL12 |
Gene ID: Bovatus_RS00070
Type: TF
Location: 1 - 2745 (+)
Type: TF
Location: 1 - 2745 (+)
Gene ID: Bovatus_RS00075
Type: null
Location: 2974 - 3384 (+)
Type: null
Location: 2974 - 3384 (+)
Gene ID: Bovatus_RS00080
Type: TF
Location: 3386 - 3916 (+)
Type: TF
Location: 3386 - 3916 (+)
Gene ID: Bovatus_RS00085
Type: TC
Location: 4014 - 7172 (+)
Type: TC
Location: 4014 - 7172 (+)
Gene ID: Bovatus_RS00090
Type: pfam
Location: 7186 - 8940 (+)
Type: pfam
Location: 7186 - 8940 (+)
Gene ID: Bovatus_RS00095
Type: pfam
Location: 8959 - 10482 (+)
Type: pfam
Location: 8959 - 10482 (+)
Gene ID: Bovatus_RS00100
Type: null
Location: 10503 - 11861 (+)
Type: null
Location: 10503 - 11861 (+)
Gene ID: Bovatus_RS00105
Type: CAZyme
Location: 11946 - 13373 (+)
Type: CAZyme
Location: 11946 - 13373 (+)
Gene ID: Bovatus_RS00110
Type: CAZyme
Location: 13547 - 14935 (+)
Type: CAZyme
Location: 13547 - 14935 (+)
Gene ID: Bovatus_RS00115
Type: CAZyme
Location: 14980 - 16911 (+)
Type: CAZyme
Location: 14980 - 16911 (+)
Gene ID: Bovatus_RS00120
Type: peptidase
Location: 16927 - 18852 (+)
Type: peptidase
Location: 16927 - 18852 (+)
Gene ID: Bovatus_RS00125
Type: CAZyme
Location: 18874 - 21141 (+)
Type: CAZyme
Location: 18874 - 21141 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides ovatus
Gene Composition
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