Cluster: PUL0736
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 3
- Substrate: alginate
- Genome ID: PUL0736
- CGC Family ID: CGCFAM_00331
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TF | NZ_GL882595 | HMPREF9445_RS08890 | 1 | 714 | - | GntR |
| pfam | NZ_GL882595 | HMPREF9445_RS08895 | 935 | 1891 | + | 2-Hacid_dh | 2-Hacid_dh_C | NAD_binding_2 |
| pfam | NZ_GL882595 | HMPREF9445_RS08900 | 1966 | 2718 | - | adh_short | KR | adh_short_C2 | SDR |
| TC | NZ_GL882595 | HMPREF9445_RS08905 | 2751 | 4217 | - | 2.A.1.14.25 |
| pfam | NZ_GL882595 | HMPREF9445_RS08910 | 4223 | 4567 | - | Cupin_2 | Cupin_7 |
| CAZyme | NZ_GL882595 | HMPREF9445_RS08915 | 4599 | 6761 | - | PL17 | PL17_2 |
| TC | NZ_GL882595 | HMPREF9445_RS08920 | 7267 | 10374 | + | 1.B.14.6.1 |
| TC | NZ_GL882595 | HMPREF9445_RS08925 | 10393 | 11838 | + | 8.A.46.1.2 |
| CAZyme | NZ_GL882595 | HMPREF9445_RS08930 | 11844 | 13424 | + | CE20 |
| CAZyme | NZ_GL882595 | HMPREF9445_RS08935 | 13453 | 15726 | + | PL6 | PL6_1 |
Gene ID: HMPREF9445_RS08890
Type: TF
Location: 1 - 714 (-)
Type: TF
Location: 1 - 714 (-)
Gene ID: HMPREF9445_RS08895
Type: pfam
Location: 935 - 1891 (+)
Type: pfam
Location: 935 - 1891 (+)
Gene ID: HMPREF9445_RS08900
Type: pfam
Location: 1966 - 2718 (-)
Type: pfam
Location: 1966 - 2718 (-)
Gene ID: HMPREF9445_RS08905
Type: TC
Location: 2751 - 4217 (-)
Type: TC
Location: 2751 - 4217 (-)
Gene ID: HMPREF9445_RS08910
Type: pfam
Location: 4223 - 4567 (-)
Type: pfam
Location: 4223 - 4567 (-)
Gene ID: HMPREF9445_RS08915
Type: CAZyme
Location: 4599 - 6761 (-)
Type: CAZyme
Location: 4599 - 6761 (-)
Gene ID: HMPREF9445_RS08920
Type: TC
Location: 7267 - 10374 (+)
Type: TC
Location: 7267 - 10374 (+)
Gene ID: HMPREF9445_RS08925
Type: TC
Location: 10393 - 11838 (+)
Type: TC
Location: 10393 - 11838 (+)
Gene ID: HMPREF9445_RS08930
Type: CAZyme
Location: 11844 - 13424 (+)
Type: CAZyme
Location: 11844 - 13424 (+)
Gene ID: HMPREF9445_RS08935
Type: CAZyme
Location: 13453 - 15726 (+)
Type: CAZyme
Location: 13453 - 15726 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides clarus
Gene Composition
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