Cluster: PUL0728
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 5
- Substrate: host glycan
- Genome ID: PUL0728
- CGC Family ID: CGCFAM_01239
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| peptidase | JABDHV010000033 | HHJ01_10845 | 1 | 705 | - | C82.UPA |
| CAZyme | JABDHV010000033 | HHJ01_10850 | 736 | 1218 | - | CBM50 |
| pfam | JABDHV010000033 | HHJ01_10855 | 1287 | 2102 | - | TatD_DNase |
| pfam | JABDHV010000033 | HHJ01_10860 | 2227 | 3294 | + | LpxR |
| CAZyme | JABDHV010000033 | HHJ01_10865 | 3437 | 7237 | + | CBM32 | GH2 |
| pfam | JABDHV010000033 | HHJ01_10870 | 7586 | 8278 | - | PEP-CTERM |
| NULL(UNKNOWN) | JABDHV010000033 | HHJ01_10875 | 8291 | 9295 | - | NULL(UNKNOWN) |
| CAZyme | JABDHV010000033 | HHJ01_10880 | 9406 | 10821 | - | GH29 |
| CAZyme | JABDHV010000033 | HHJ01_10885 | 11167 | 13524 | - | GH33 |
| sulfatase | JABDHV010000033 | HHJ01_10890 | 13406 | 14308 | - | S1_8 |
| STP | JABDHV010000033 | HHJ01_10895 | 14503 | 17181 | + | HATPase_c | HisKA |
| TF | JABDHV010000033 | HHJ01_10900 | 17201 | 17899 | + | Trans_reg_C |
| TC | JABDHV010000033 | HHJ01_10905 | 18050 | 18829 | + | 1.B.71.1.5 |
| TC | JABDHV010000033 | HHJ01_10910 | 18947 | 20647 | + | 3.A.3.7.2 |
| TC | JABDHV010000033 | HHJ01_10915 | 20681 | 22792 | + | 3.A.3.7.2 |
| TC | JABDHV010000033 | HHJ01_10920 | 22822 | 23388 | + | 3.A.3.7.2 |
| CAZyme | JABDHV010000033 | HHJ01_10925 | 23538 | 25139 | - | GH27 |
| TC | JABDHV010000033 | HHJ01_10930 | 25312 | 27894 | + | 3.A.9.1.2 |
Gene ID: HHJ01_10845
Type: peptidase
Location: 1 - 705 (-)
Type: peptidase
Location: 1 - 705 (-)
Gene ID: HHJ01_10850
Type: CAZyme
Location: 736 - 1218 (-)
Type: CAZyme
Location: 736 - 1218 (-)
Gene ID: HHJ01_10855
Type: pfam
Location: 1287 - 2102 (-)
Type: pfam
Location: 1287 - 2102 (-)
Gene ID: HHJ01_10860
Type: pfam
Location: 2227 - 3294 (+)
Type: pfam
Location: 2227 - 3294 (+)
Gene ID: HHJ01_10865
Type: CAZyme
Location: 3437 - 7237 (+)
Type: CAZyme
Location: 3437 - 7237 (+)
Gene ID: HHJ01_10870
Type: pfam
Location: 7586 - 8278 (-)
Type: pfam
Location: 7586 - 8278 (-)
Gene ID: HHJ01_10875
Type: null
Location: 8291 - 9295 (-)
Type: null
Location: 8291 - 9295 (-)
Gene ID: HHJ01_10880
Type: CAZyme
Location: 9406 - 10821 (-)
Type: CAZyme
Location: 9406 - 10821 (-)
Gene ID: HHJ01_10885
Type: CAZyme
Location: 11167 - 13524 (-)
Type: CAZyme
Location: 11167 - 13524 (-)
Gene ID: HHJ01_10890
Type: sulfatase
Location: 13406 - 14308 (-)
Type: sulfatase
Location: 13406 - 14308 (-)
Gene ID: HHJ01_10895
Type: STP
Location: 14503 - 17181 (+)
Type: STP
Location: 14503 - 17181 (+)
Gene ID: HHJ01_10900
Type: TF
Location: 17201 - 17899 (+)
Type: TF
Location: 17201 - 17899 (+)
Gene ID: HHJ01_10905
Type: TC
Location: 18050 - 18829 (+)
Type: TC
Location: 18050 - 18829 (+)
Gene ID: HHJ01_10910
Type: TC
Location: 18947 - 20647 (+)
Type: TC
Location: 18947 - 20647 (+)
Gene ID: HHJ01_10915
Type: TC
Location: 20681 - 22792 (+)
Type: TC
Location: 20681 - 22792 (+)
Gene ID: HHJ01_10920
Type: TC
Location: 22822 - 23388 (+)
Type: TC
Location: 22822 - 23388 (+)
Gene ID: HHJ01_10925
Type: CAZyme
Location: 23538 - 25139 (-)
Type: CAZyme
Location: 23538 - 25139 (-)
Gene ID: HHJ01_10930
Type: TC
Location: 25312 - 27894 (+)
Type: TC
Location: 25312 - 27894 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiia
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila
Gene Composition
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