Cluster: PUL0687_C134.bin_6_C0
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate: xylan
- Genome ID: C134.bin_6
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | PUL0687_C134.bin_6_C0 | C134_contig_431_3468 | 4235441 | 4236979 | + | 2.A.2.3.4 |
| CAZyme | PUL0687_C134.bin_6_C0 | C134_contig_431_3469 | 4237019 | 4238140 | + | GH10 |
| CAZyme | PUL0687_C134.bin_6_C0 | C134_contig_431_3470 | 4238153 | 4239124 | + | GH43_1 |
| CAZyme | PUL0687_C134.bin_6_C0 | C134_contig_431_3471 | 4239387 | 4241210 | + | CBM91 | GH43_12 |
| TC | PUL0687_C134.bin_6_C0 | C134_contig_431_3472 | 4241252 | 4244323 | + | 1.B.14.6.1 |
| pfam | PUL0687_C134.bin_6_C0 | C134_contig_431_3473 | 4244338 | 4246272 | + | SusD_RagB | SusD-like_3 |
Gene ID: C134_contig_431_3468
Type: TC
Location: 4235441 - 4236979 (+)
Type: TC
Location: 4235441 - 4236979 (+)
Gene ID: C134_contig_431_3469
Type: CAZyme
Location: 4237019 - 4238140 (+)
Type: CAZyme
Location: 4237019 - 4238140 (+)
Gene ID: C134_contig_431_3470
Type: CAZyme
Location: 4238153 - 4239124 (+)
Type: CAZyme
Location: 4238153 - 4239124 (+)
Gene ID: C134_contig_431_3471
Type: CAZyme
Location: 4239387 - 4241210 (+)
Type: CAZyme
Location: 4239387 - 4241210 (+)
Gene ID: C134_contig_431_3472
Type: TC
Location: 4241252 - 4244323 (+)
Type: TC
Location: 4241252 - 4244323 (+)
Gene ID: C134_contig_431_3473
Type: pfam
Location: 4244338 - 4246272 (+)
Type: pfam
Location: 4244338 - 4246272 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola vulgatus
Gene Composition
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