Cluster: PUL0658_C19.bin_2_C1
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate: beta-mannan
- Genome ID: C19.bin_2
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0658_C19.bin_2_C1 | C19_contig_698_1744 | 1893800 | 1894882 | - | CBM35inCE17 | CE17 |
| CAZyme | PUL0658_C19.bin_2_C1 | C19_contig_698_1745 | 1894879 | 1895808 | - | GH113 |
| CAZyme | PUL0658_C19.bin_2_C1 | C19_contig_698_1746 | 1896080 | 1897192 | + | CE2 |
| TF | PUL0658_C19.bin_2_C1 | C19_contig_698_1747 | 1897305 | 1898291 | - | LacI |
| STP | PUL0658_C19.bin_2_C1 | C19_contig_698_1748 | 1898683 | 1900095 | + | SBP_bac_1 |
| TC | PUL0658_C19.bin_2_C1 | C19_contig_698_1749 | 1900167 | 1901114 | + | 3.A.1.1.28 |
| TC | PUL0658_C19.bin_2_C1 | C19_contig_698_1750 | 1901131 | 1901976 | + | 3.A.1.1.34 |
| CAZyme | PUL0658_C19.bin_2_C1 | C19_contig_698_1751 | 1902094 | 1903113 | + | GH130_2 |
| pfam | PUL0658_C19.bin_2_C1 | C19_contig_698_1752 | 1903254 | 1904435 | + | GlcNAc_2-epim |
| CAZyme | PUL0658_C19.bin_2_C1 | C19_contig_698_1753 | 1904422 | 1905612 | + | GH130_1 |
| TC | PUL0658_C19.bin_2_C1 | C19_contig_698_1754 | 1905650 | 1906330 | + | 9.B.28.1.2 |
| pfam | PUL0658_C19.bin_2_C1 | C19_contig_698_1755 | 1906375 | 1908060 | + | PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| pfam | PUL0658_C19.bin_2_C1 | C19_contig_698_1756 | 1908180 | 1909094 | + | PMI_typeI_cat | MPI_cupin_dom |
Gene ID: C19_contig_698_1744
Type: CAZyme
Location: 1893800 - 1894882 (-)
Type: CAZyme
Location: 1893800 - 1894882 (-)
Gene ID: C19_contig_698_1745
Type: CAZyme
Location: 1894879 - 1895808 (-)
Type: CAZyme
Location: 1894879 - 1895808 (-)
Gene ID: C19_contig_698_1746
Type: CAZyme
Location: 1896080 - 1897192 (+)
Type: CAZyme
Location: 1896080 - 1897192 (+)
Gene ID: C19_contig_698_1747
Type: TF
Location: 1897305 - 1898291 (-)
Type: TF
Location: 1897305 - 1898291 (-)
Gene ID: C19_contig_698_1748
Type: STP
Location: 1898683 - 1900095 (+)
Type: STP
Location: 1898683 - 1900095 (+)
Gene ID: C19_contig_698_1749
Type: TC
Location: 1900167 - 1901114 (+)
Type: TC
Location: 1900167 - 1901114 (+)
Gene ID: C19_contig_698_1750
Type: TC
Location: 1901131 - 1901976 (+)
Type: TC
Location: 1901131 - 1901976 (+)
Gene ID: C19_contig_698_1751
Type: CAZyme
Location: 1902094 - 1903113 (+)
Type: CAZyme
Location: 1902094 - 1903113 (+)
Gene ID: C19_contig_698_1752
Type: pfam
Location: 1903254 - 1904435 (+)
Type: pfam
Location: 1903254 - 1904435 (+)
Gene ID: C19_contig_698_1753
Type: CAZyme
Location: 1904422 - 1905612 (+)
Type: CAZyme
Location: 1904422 - 1905612 (+)
Gene ID: C19_contig_698_1754
Type: TC
Location: 1905650 - 1906330 (+)
Type: TC
Location: 1905650 - 1906330 (+)
Gene ID: C19_contig_698_1755
Type: pfam
Location: 1906375 - 1908060 (+)
Type: pfam
Location: 1906375 - 1908060 (+)
Gene ID: C19_contig_698_1756
Type: pfam
Location: 1908180 - 1909094 (+)
Type: pfam
Location: 1908180 - 1909094 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium duncaniae
Gene Composition
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