Cluster: PUL0619_HRGMv2_4000_C0
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: xylan
- Genome ID: HRGMv2_4000
- CGC Family ID: CGCFAM_00001
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | PUL0619_HRGMv2_4000_C0 | HRGMv2_4000_34_1 | 3 | 3215 | + | 1.B.14.6.1 |
| pfam | PUL0619_HRGMv2_4000_C0 | HRGMv2_4000_34_2 | 3277 | 4881 | + | SusD_RagB | SusD-like_3 |
| NULL(UNKNOWN) | PUL0619_HRGMv2_4000_C0 | HRGMv2_4000_34_5 | 7308 | 8129 | + | NULL(UNKNOWN) |
| CAZyme | PUL0619_HRGMv2_4000_C0 | HRGMv2_4000_34_6 | 8432 | 10834 | + | GH35 |
Gene ID: HRGMv2_4000_34_1
Type: TC
Location: 3 - 3215 (+)
Type: TC
Location: 3 - 3215 (+)
Gene ID: HRGMv2_4000_34_2
Type: pfam
Location: 3277 - 4881 (+)
Type: pfam
Location: 3277 - 4881 (+)
Gene ID: HRGMv2_4000_34_5
Type: null
Location: 7308 - 8129 (+)
Type: null
Location: 7308 - 8129 (+)
Gene ID: HRGMv2_4000_34_6
Type: CAZyme
Location: 8432 - 10834 (+)
Type: CAZyme
Location: 8432 - 10834 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella rodentium
Gene Composition
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