Cluster: PUL0571_HRGMv2_1796_C27
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate: chitin
- Genome ID: HRGMv2_1796
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| pfam | PUL0571_HRGMv2_1796_C27 | HRGMv2_1796_2_36 | 34515 | 35345 | - | NAD_synthase |
| pfam | PUL0571_HRGMv2_1796_C27 | HRGMv2_1796_2_37 | 35556 | 35897 | + | BamE |
| TC | PUL0571_HRGMv2_1796_C27 | HRGMv2_1796_2_38 | 36195 | 36515 | + | 4.A.3.2.7 |
| TC | PUL0571_HRGMv2_1796_C27 | HRGMv2_1796_2_39 | 36603 | 37961 | + | 4.A.3.2.1 |
| TC | PUL0571_HRGMv2_1796_C27 | HRGMv2_1796_2_40 | 38017 | 38364 | + | 4.A.3.2.1 |
| TF | PUL0571_HRGMv2_1796_C27 | HRGMv2_1796_2_41 | 38378 | 39217 | + | HTH_AraC | HTH_AraC |
| CAZyme | PUL0571_HRGMv2_1796_C27 | HRGMv2_1796_2_42 | 39342 | 40697 | + | GH4 |
| pfam | PUL0571_HRGMv2_1796_C27 | HRGMv2_1796_2_43 | 40710 | 41468 | + | YdjC |
Gene ID: HRGMv2_1796_2_36
Type: pfam
Location: 34515 - 35345 (-)
Type: pfam
Location: 34515 - 35345 (-)
Gene ID: HRGMv2_1796_2_37
Type: pfam
Location: 35556 - 35897 (+)
Type: pfam
Location: 35556 - 35897 (+)
Gene ID: HRGMv2_1796_2_38
Type: TC
Location: 36195 - 36515 (+)
Type: TC
Location: 36195 - 36515 (+)
Gene ID: HRGMv2_1796_2_39
Type: TC
Location: 36603 - 37961 (+)
Type: TC
Location: 36603 - 37961 (+)
Gene ID: HRGMv2_1796_2_40
Type: TC
Location: 38017 - 38364 (+)
Type: TC
Location: 38017 - 38364 (+)
Gene ID: HRGMv2_1796_2_41
Type: TF
Location: 38378 - 39217 (+)
Type: TF
Location: 38378 - 39217 (+)
Gene ID: HRGMv2_1796_2_42
Type: CAZyme
Location: 39342 - 40697 (+)
Type: CAZyme
Location: 39342 - 40697 (+)
Gene ID: HRGMv2_1796_2_43
Type: pfam
Location: 40710 - 41468 (+)
Type: pfam
Location: 40710 - 41468 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Species
Citrobacter braakii
Gene Composition
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