Cluster: PUL0556_C89.bin_3_C1
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate: host glycan
- Genome ID: C89.bin_3
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| pfam | PUL0556_C89.bin_3_C1 | C89_contig_14_1973 | 2359356 | 2360369 | - | F5_F8_type_C | BT_3987-like_N |
| pfam | PUL0556_C89.bin_3_C1 | C89_contig_14_1974 | 2360392 | 2361528 | - | BT_3987-like_N | Laminin_G_3 |
| CAZyme | PUL0556_C89.bin_3_C1 | C89_contig_14_1975 | 2361546 | 2362598 | - | GH18 |
| TC | PUL0556_C89.bin_3_C1 | C89_contig_14_1976 | 2362626 | 2364170 | - | 8.A.46.2.1 |
| TC | PUL0556_C89.bin_3_C1 | C89_contig_14_1977 | 2364183 | 2367488 | - | 1.B.14.6.13 |
| STP | PUL0556_C89.bin_3_C1 | C89_contig_14_1978 | 2367798 | 2368808 | - | FecR |
| TF | PUL0556_C89.bin_3_C1 | C89_contig_14_1979 | 2368974 | 2369573 | + | GerE |
| CAZyme | PUL0556_C89.bin_3_C1 | C89_contig_14_1980 | 2369550 | 2371565 | - | GH97 |
Gene ID: C89_contig_14_1973
Type: pfam
Location: 2359356 - 2360369 (-)
Type: pfam
Location: 2359356 - 2360369 (-)
Gene ID: C89_contig_14_1974
Type: pfam
Location: 2360392 - 2361528 (-)
Type: pfam
Location: 2360392 - 2361528 (-)
Gene ID: C89_contig_14_1975
Type: CAZyme
Location: 2361546 - 2362598 (-)
Type: CAZyme
Location: 2361546 - 2362598 (-)
Gene ID: C89_contig_14_1976
Type: TC
Location: 2362626 - 2364170 (-)
Type: TC
Location: 2362626 - 2364170 (-)
Gene ID: C89_contig_14_1977
Type: TC
Location: 2364183 - 2367488 (-)
Type: TC
Location: 2364183 - 2367488 (-)
Gene ID: C89_contig_14_1978
Type: STP
Location: 2367798 - 2368808 (-)
Type: STP
Location: 2367798 - 2368808 (-)
Gene ID: C89_contig_14_1979
Type: TF
Location: 2368974 - 2369573 (+)
Type: TF
Location: 2368974 - 2369573 (+)
Gene ID: C89_contig_14_1980
Type: CAZyme
Location: 2369550 - 2371565 (-)
Type: CAZyme
Location: 2369550 - 2371565 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides fragilis
Gene Composition
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