Cluster: PUL0552_Rep_456_C0
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate: arabinogalactan
- Genome ID: Rep_456
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | PUL0552_Rep_456_C0 | Rep_456_c_48_10 | 19722 | 23126 | + | 1.B.14.6.1 |
| pfam | PUL0552_Rep_456_C0 | Rep_456_c_48_11 | 23156 | 25237 | + | SusD_RagB | SusD-like_3 |
| CAZyme | PUL0552_Rep_456_C0 | Rep_456_c_48_12 | 25418 | 27145 | + | PL1_2 |
| pfam | PUL0552_Rep_456_C0 | Rep_456_c_48_13 | 27151 | 27819 | + | DUF3826 |
| CAZyme | PUL0552_Rep_456_C0 | Rep_456_c_48_14 | 28003 | 28932 | + | GH43_18 |
| CAZyme | PUL0552_Rep_456_C0 | Rep_456_c_48_15 | 28954 | 32277 | + | GH142 | GH143 |
| CAZyme | PUL0552_Rep_456_C0 | Rep_456_c_48_16 | 32306 | 35155 | + | CBM67 | GH78 |
Gene ID: Rep_456_c_48_10
Type: TC
Location: 19722 - 23126 (+)
Type: TC
Location: 19722 - 23126 (+)
Gene ID: Rep_456_c_48_11
Type: pfam
Location: 23156 - 25237 (+)
Type: pfam
Location: 23156 - 25237 (+)
Gene ID: Rep_456_c_48_12
Type: CAZyme
Location: 25418 - 27145 (+)
Type: CAZyme
Location: 25418 - 27145 (+)
Gene ID: Rep_456_c_48_13
Type: pfam
Location: 27151 - 27819 (+)
Type: pfam
Location: 27151 - 27819 (+)
Gene ID: Rep_456_c_48_14
Type: CAZyme
Location: 28003 - 28932 (+)
Type: CAZyme
Location: 28003 - 28932 (+)
Gene ID: Rep_456_c_48_15
Type: CAZyme
Location: 28954 - 32277 (+)
Type: CAZyme
Location: 28954 - 32277 (+)
Gene ID: Rep_456_c_48_16
Type: CAZyme
Location: 32306 - 35155 (+)
Type: CAZyme
Location: 32306 - 35155 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900759525
Gene Composition
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