Cluster: PUL0545_Rep_456_C1
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 6
- Substrate: xylan
- Genome ID: Rep_456
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0545_Rep_456_C1 | Rep_456_c_0_1 | 303 | 1460 | + | CE1 |
| NULL(UNKNOWN) | PUL0545_Rep_456_C1 | Rep_456_c_0_2 | 1489 | 2187 | + | NULL(UNKNOWN) |
| CAZyme | PUL0545_Rep_456_C1 | Rep_456_c_0_3 | 2190 | 3641 | + | GH43_7 | GH43_7 |
| TC | PUL0545_Rep_456_C1 | Rep_456_c_0_4 | 3904 | 7035 | + | 1.B.14.6.1 |
| pfam | PUL0545_Rep_456_C1 | Rep_456_c_0_5 | 7059 | 8795 | + | SusD_RagB |
| CAZyme | PUL0545_Rep_456_C1 | Rep_456_c_0_6 | 9259 | 11736 | + | GH9 |
| CAZyme | PUL0545_Rep_456_C1 | Rep_456_c_0_7 | 11925 | 12983 | + | GH43_17 |
| CAZyme | PUL0545_Rep_456_C1 | Rep_456_c_0_8 | 13032 | 15632 | + | GH3 |
| CAZyme | PUL0545_Rep_456_C1 | Rep_456_c_0_9 | 15958 | 17289 | + | CBM6 | GH43_2 |
| TF | PUL0545_Rep_456_C1 | Rep_456_c_0_10 | 17300 | 21403 | + | HTH_AraC |
Gene ID: Rep_456_c_0_1
Type: CAZyme
Location: 303 - 1460 (+)
Type: CAZyme
Location: 303 - 1460 (+)
Gene ID: Rep_456_c_0_2
Type: null
Location: 1489 - 2187 (+)
Type: null
Location: 1489 - 2187 (+)
Gene ID: Rep_456_c_0_3
Type: CAZyme
Location: 2190 - 3641 (+)
Type: CAZyme
Location: 2190 - 3641 (+)
Gene ID: Rep_456_c_0_4
Type: TC
Location: 3904 - 7035 (+)
Type: TC
Location: 3904 - 7035 (+)
Gene ID: Rep_456_c_0_5
Type: pfam
Location: 7059 - 8795 (+)
Type: pfam
Location: 7059 - 8795 (+)
Gene ID: Rep_456_c_0_6
Type: CAZyme
Location: 9259 - 11736 (+)
Type: CAZyme
Location: 9259 - 11736 (+)
Gene ID: Rep_456_c_0_7
Type: CAZyme
Location: 11925 - 12983 (+)
Type: CAZyme
Location: 11925 - 12983 (+)
Gene ID: Rep_456_c_0_8
Type: CAZyme
Location: 13032 - 15632 (+)
Type: CAZyme
Location: 13032 - 15632 (+)
Gene ID: Rep_456_c_0_9
Type: CAZyme
Location: 15958 - 17289 (+)
Type: CAZyme
Location: 15958 - 17289 (+)
Gene ID: Rep_456_c_0_10
Type: TF
Location: 17300 - 21403 (+)
Type: TF
Location: 17300 - 21403 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900759525
Gene Composition
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