Cluster: PUL0533_Rep_456_C4
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 3
- Substrate: xylan
- Genome ID: Rep_456
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TF | PUL0533_Rep_456_C4 | Rep_456_c_4_137 | 143556 | 147680 | + | HTH_AraC | HTH_AraC |
| CAZyme | PUL0533_Rep_456_C4 | Rep_456_c_4_138 | 147672 | 150251 | - | GH115 |
| TC | PUL0533_Rep_456_C4 | Rep_456_c_4_139 | 150614 | 153760 | + | 1.B.14.6.1 |
| pfam | PUL0533_Rep_456_C4 | Rep_456_c_4_140 | 153804 | 155654 | + | SusD_RagB | SusD-like_3 |
| TC | PUL0533_Rep_456_C4 | Rep_456_c_4_141 | 155687 | 158512 | + | 1.B.14.6.1 |
| pfam | PUL0533_Rep_456_C4 | Rep_456_c_4_142 | 158540 | 160297 | + | SusD_RagB | SusD-like_3 |
| pfam | PUL0533_Rep_456_C4 | Rep_456_c_4_143 | 160334 | 161368 | + | BT_3987-like_N | DUF5627 |
| CAZyme | PUL0533_Rep_456_C4 | Rep_456_c_4_144 | 161403 | 163616 | + | GH10 |
| CAZyme | PUL0533_Rep_456_C4 | Rep_456_c_4_145 | 163628 | 165268 | + | GH30_8 |
Gene ID: Rep_456_c_4_137
Type: TF
Location: 143556 - 147680 (+)
Type: TF
Location: 143556 - 147680 (+)
Gene ID: Rep_456_c_4_138
Type: CAZyme
Location: 147672 - 150251 (-)
Type: CAZyme
Location: 147672 - 150251 (-)
Gene ID: Rep_456_c_4_139
Type: TC
Location: 150614 - 153760 (+)
Type: TC
Location: 150614 - 153760 (+)
Gene ID: Rep_456_c_4_140
Type: pfam
Location: 153804 - 155654 (+)
Type: pfam
Location: 153804 - 155654 (+)
Gene ID: Rep_456_c_4_141
Type: TC
Location: 155687 - 158512 (+)
Type: TC
Location: 155687 - 158512 (+)
Gene ID: Rep_456_c_4_142
Type: pfam
Location: 158540 - 160297 (+)
Type: pfam
Location: 158540 - 160297 (+)
Gene ID: Rep_456_c_4_143
Type: pfam
Location: 160334 - 161368 (+)
Type: pfam
Location: 160334 - 161368 (+)
Gene ID: Rep_456_c_4_144
Type: CAZyme
Location: 161403 - 163616 (+)
Type: CAZyme
Location: 161403 - 163616 (+)
Gene ID: Rep_456_c_4_145
Type: CAZyme
Location: 163628 - 165268 (+)
Type: CAZyme
Location: 163628 - 165268 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900759525
Gene Composition
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