Cluster: PUL0519_HRGMv2_2532_C10
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: HRGMv2_2532
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TF | PUL0519_HRGMv2_2532_C10 | HRGMv2_2532_25_25 | 22813 | 23799 | - | LacI |
| NULL(UNKNOWN) | PUL0519_HRGMv2_2532_C10 | HRGMv2_2532_25_26 | 23809 | 24609 | - | NULL(UNKNOWN) |
| TC | PUL0519_HRGMv2_2532_C10 | HRGMv2_2532_25_27 | 24907 | 25749 | - | 3.A.1.1.26 |
| TC | PUL0519_HRGMv2_2532_C10 | HRGMv2_2532_25_28 | 25751 | 27043 | - | 3.A.1.1.26 |
| TC | PUL0519_HRGMv2_2532_C10 | HRGMv2_2532_25_29 | 27154 | 28425 | - | 3.A.1.1.26 |
| CAZyme | PUL0519_HRGMv2_2532_C10 | HRGMv2_2532_25_30 | 28904 | 30421 | + | GH77 |
| CAZyme | PUL0519_HRGMv2_2532_C10 | HRGMv2_2532_25_31 | 30447 | 32705 | + | GT35 |
Gene ID: HRGMv2_2532_25_25
Type: TF
Location: 22813 - 23799 (-)
Type: TF
Location: 22813 - 23799 (-)
Gene ID: HRGMv2_2532_25_26
Type: null
Location: 23809 - 24609 (-)
Type: null
Location: 23809 - 24609 (-)
Gene ID: HRGMv2_2532_25_27
Type: TC
Location: 24907 - 25749 (-)
Type: TC
Location: 24907 - 25749 (-)
Gene ID: HRGMv2_2532_25_28
Type: TC
Location: 25751 - 27043 (-)
Type: TC
Location: 25751 - 27043 (-)
Gene ID: HRGMv2_2532_25_29
Type: TC
Location: 27154 - 28425 (-)
Type: TC
Location: 27154 - 28425 (-)
Gene ID: HRGMv2_2532_25_30
Type: CAZyme
Location: 28904 - 30421 (+)
Type: CAZyme
Location: 28904 - 30421 (+)
Gene ID: HRGMv2_2532_25_31
Type: CAZyme
Location: 30447 - 32705 (+)
Type: CAZyme
Location: 30447 - 32705 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus pseudopneumoniae_E
Gene Composition
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