Cluster: PUL0519_HRGMv2_2504_C4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: HRGMv2_2504
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0519_HRGMv2_2504_C4 | HRGMv2_2504_9_18 | 19358 | 21616 | - | GT35 |
| CAZyme | PUL0519_HRGMv2_2504_C4 | HRGMv2_2504_9_19 | 21641 | 23158 | - | GH77 |
| TC | PUL0519_HRGMv2_2504_C4 | HRGMv2_2504_9_20 | 23634 | 24902 | + | 3.A.1.1.26 |
| TC | PUL0519_HRGMv2_2504_C4 | HRGMv2_2504_9_21 | 25027 | 26319 | + | 3.A.1.1.26 |
| TC | PUL0519_HRGMv2_2504_C4 | HRGMv2_2504_9_22 | 26321 | 27163 | + | 3.A.1.1.26 |
| NULL(UNKNOWN) | PUL0519_HRGMv2_2504_C4 | HRGMv2_2504_9_23 | 27405 | 28211 | + | NULL(UNKNOWN) |
| TF | PUL0519_HRGMv2_2504_C4 | HRGMv2_2504_9_24 | 28221 | 29207 | + | LacI |
Gene ID: HRGMv2_2504_9_18
Type: CAZyme
Location: 19358 - 21616 (-)
Type: CAZyme
Location: 19358 - 21616 (-)
Gene ID: HRGMv2_2504_9_19
Type: CAZyme
Location: 21641 - 23158 (-)
Type: CAZyme
Location: 21641 - 23158 (-)
Gene ID: HRGMv2_2504_9_20
Type: TC
Location: 23634 - 24902 (+)
Type: TC
Location: 23634 - 24902 (+)
Gene ID: HRGMv2_2504_9_21
Type: TC
Location: 25027 - 26319 (+)
Type: TC
Location: 25027 - 26319 (+)
Gene ID: HRGMv2_2504_9_22
Type: TC
Location: 26321 - 27163 (+)
Type: TC
Location: 26321 - 27163 (+)
Gene ID: HRGMv2_2504_9_23
Type: null
Location: 27405 - 28211 (+)
Type: null
Location: 27405 - 28211 (+)
Gene ID: HRGMv2_2504_9_24
Type: TF
Location: 28221 - 29207 (+)
Type: TF
Location: 28221 - 29207 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus oralis_E
Gene Composition
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