Cluster: PUL0519_HRGMv2_2500_C19
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: HRGMv2_2500
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0519_HRGMv2_2500_C19 | HRGMv2_2500_6_19 | 21807 | 24065 | - | GT35 |
| CAZyme | PUL0519_HRGMv2_2500_C19 | HRGMv2_2500_6_20 | 24090 | 25607 | - | GH77 |
| TC | PUL0519_HRGMv2_2500_C19 | HRGMv2_2500_6_21 | 26084 | 27352 | + | 3.A.1.1.26 |
| TC | PUL0519_HRGMv2_2500_C19 | HRGMv2_2500_6_22 | 27477 | 28769 | + | 3.A.1.1.26 |
| TC | PUL0519_HRGMv2_2500_C19 | HRGMv2_2500_6_23 | 28771 | 29613 | + | 3.A.1.1.26 |
| NULL(UNKNOWN) | PUL0519_HRGMv2_2500_C19 | HRGMv2_2500_6_24 | 29867 | 30673 | + | NULL(UNKNOWN) |
| TF | PUL0519_HRGMv2_2500_C19 | HRGMv2_2500_6_25 | 30683 | 31669 | + | LacI |
Gene ID: HRGMv2_2500_6_19
Type: CAZyme
Location: 21807 - 24065 (-)
Type: CAZyme
Location: 21807 - 24065 (-)
Gene ID: HRGMv2_2500_6_20
Type: CAZyme
Location: 24090 - 25607 (-)
Type: CAZyme
Location: 24090 - 25607 (-)
Gene ID: HRGMv2_2500_6_21
Type: TC
Location: 26084 - 27352 (+)
Type: TC
Location: 26084 - 27352 (+)
Gene ID: HRGMv2_2500_6_22
Type: TC
Location: 27477 - 28769 (+)
Type: TC
Location: 27477 - 28769 (+)
Gene ID: HRGMv2_2500_6_23
Type: TC
Location: 28771 - 29613 (+)
Type: TC
Location: 28771 - 29613 (+)
Gene ID: HRGMv2_2500_6_24
Type: null
Location: 29867 - 30673 (+)
Type: null
Location: 29867 - 30673 (+)
Gene ID: HRGMv2_2500_6_25
Type: TF
Location: 30683 - 31669 (+)
Type: TF
Location: 30683 - 31669 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus oralis_S
Gene Composition
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