Cluster: PUL0420_SPMP06_bin.48_C9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate: pectin
- Genome ID: SPMP06_bin.48
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | PUL0420_SPMP06_bin.48_C9 | opera_contig_191937_404 | 525475 | 528540 | + | 1.B.14.6.1 |
| pfam | PUL0420_SPMP06_bin.48_C9 | opera_contig_191937_405 | 528632 | 530161 | + | SusD_RagB | SusD-like_3 |
| CAZyme | PUL0420_SPMP06_bin.48_C9 | opera_contig_191937_406 | 530183 | 532492 | + | GH3 |
| CAZyme | PUL0420_SPMP06_bin.48_C9 | opera_contig_191937_407 | 532604 | 534007 | + | GH144 |
Gene ID: opera_contig_191937_404
Type: TC
Location: 525475 - 528540 (+)
Type: TC
Location: 525475 - 528540 (+)
Gene ID: opera_contig_191937_405
Type: pfam
Location: 528632 - 530161 (+)
Type: pfam
Location: 528632 - 530161 (+)
Gene ID: opera_contig_191937_406
Type: CAZyme
Location: 530183 - 532492 (+)
Type: CAZyme
Location: 530183 - 532492 (+)
Gene ID: opera_contig_191937_407
Type: CAZyme
Location: 532604 - 534007 (+)
Type: CAZyme
Location: 532604 - 534007 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides caccae
Gene Composition
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