Cluster: PUL0420_HRGMv2_0159_C17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate: pectin
- Genome ID: HRGMv2_0159
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0420_HRGMv2_0159_C17 | HRGMv2_0159_21_4 | 4480 | 5853 | - | GH144 |
| CAZyme | PUL0420_HRGMv2_0159_C17 | HRGMv2_0159_21_5 | 5902 | 8211 | - | GH3 |
| pfam | PUL0420_HRGMv2_0159_C17 | HRGMv2_0159_21_6 | 8355 | 9884 | - | SusD_RagB | SusD-like_3 |
| TC | PUL0420_HRGMv2_0159_C17 | HRGMv2_0159_21_7 | 9897 | 12962 | - | 1.B.14.6.1 |
Gene ID: HRGMv2_0159_21_4
Type: CAZyme
Location: 4480 - 5853 (-)
Type: CAZyme
Location: 4480 - 5853 (-)
Gene ID: HRGMv2_0159_21_5
Type: CAZyme
Location: 5902 - 8211 (-)
Type: CAZyme
Location: 5902 - 8211 (-)
Gene ID: HRGMv2_0159_21_6
Type: pfam
Location: 8355 - 9884 (-)
Type: pfam
Location: 8355 - 9884 (-)
Gene ID: HRGMv2_0159_21_7
Type: TC
Location: 9897 - 12962 (-)
Type: TC
Location: 9897 - 12962 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Composition
Loading chart...
← Back to Cluster List