Cluster: PUL0417_HRGMv2_0159_C0
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate: pectin
- Genome ID: HRGMv2_0159
- CGC Family ID: CGCFAM_06468
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| pfam | PUL0417_HRGMv2_0159_C0 | HRGMv2_0159_38_12 | 18970 | 20217 | - | NAGPA |
| CAZyme | PUL0417_HRGMv2_0159_C0 | HRGMv2_0159_38_13 | 20240 | 22570 | - | CE20 |
| pfam | PUL0417_HRGMv2_0159_C0 | HRGMv2_0159_38_14 | 22578 | 23981 | - | DUF5009 |
| NULL(UNKNOWN) | PUL0417_HRGMv2_0159_C0 | HRGMv2_0159_38_15 | 24011 | 24895 | - | NULL(UNKNOWN) |
| NULL(UNKNOWN) | PUL0417_HRGMv2_0159_C0 | HRGMv2_0159_38_16 | 24938 | 25813 | - | NULL(UNKNOWN) |
| NULL(UNKNOWN) | PUL0417_HRGMv2_0159_C0 | HRGMv2_0159_38_17 | 25872 | 27665 | - | NULL(UNKNOWN) |
| pfam | PUL0417_HRGMv2_0159_C0 | HRGMv2_0159_38_18 | 27690 | 29699 | - | GHL10 |
| pfam | PUL0417_HRGMv2_0159_C0 | HRGMv2_0159_38_19 | 29717 | 31603 | - | SusD_RagB | SusD-like_2 | SusD-like_3 |
| TC | PUL0417_HRGMv2_0159_C0 | HRGMv2_0159_38_20 | 31617 | 34616 | - | 1.B.14.6.1 |
| pfam | PUL0417_HRGMv2_0159_C0 | HRGMv2_0159_38_21 | 34664 | 35929 | - | GlcNAc_2-epim |
Gene ID: HRGMv2_0159_38_12
Type: pfam
Location: 18970 - 20217 (-)
Type: pfam
Location: 18970 - 20217 (-)
Gene ID: HRGMv2_0159_38_13
Type: CAZyme
Location: 20240 - 22570 (-)
Type: CAZyme
Location: 20240 - 22570 (-)
Gene ID: HRGMv2_0159_38_14
Type: pfam
Location: 22578 - 23981 (-)
Type: pfam
Location: 22578 - 23981 (-)
Gene ID: HRGMv2_0159_38_15
Type: null
Location: 24011 - 24895 (-)
Type: null
Location: 24011 - 24895 (-)
Gene ID: HRGMv2_0159_38_16
Type: null
Location: 24938 - 25813 (-)
Type: null
Location: 24938 - 25813 (-)
Gene ID: HRGMv2_0159_38_17
Type: null
Location: 25872 - 27665 (-)
Type: null
Location: 25872 - 27665 (-)
Gene ID: HRGMv2_0159_38_18
Type: pfam
Location: 27690 - 29699 (-)
Type: pfam
Location: 27690 - 29699 (-)
Gene ID: HRGMv2_0159_38_19
Type: pfam
Location: 29717 - 31603 (-)
Type: pfam
Location: 29717 - 31603 (-)
Gene ID: HRGMv2_0159_38_20
Type: TC
Location: 31617 - 34616 (-)
Type: TC
Location: 31617 - 34616 (-)
Gene ID: HRGMv2_0159_38_21
Type: pfam
Location: 34664 - 35929 (-)
Type: pfam
Location: 34664 - 35929 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Composition
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