Cluster: PUL0402_HRGMv2_2496_C1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate: xylan
- Genome ID: HRGMv2_2496
- CGC Family ID: CGCFAM_02289
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TF | PUL0402_HRGMv2_2496_C1 | HRGMv2_2496_5_61 | 59860 | 60792 | - | HTH_AraC | HTH_AraC |
| pfam | PUL0402_HRGMv2_2496_C1 | HRGMv2_2496_5_62 | 60903 | 62222 | + | AP_endonuc_2 |
| pfam | PUL0402_HRGMv2_2496_C1 | HRGMv2_2496_5_64 | 63229 | 64734 | + | FGGY_N | FGGY_C |
| pfam | PUL0402_HRGMv2_2496_C1 | HRGMv2_2496_5_65 | 64737 | 65741 | + | Aldose_epim |
| CAZyme | PUL0402_HRGMv2_2496_C1 | HRGMv2_2496_5_68 | 68164 | 69843 | + | CBM91 | GH43_11 |
Gene ID: HRGMv2_2496_5_61
Type: TF
Location: 59860 - 60792 (-)
Type: TF
Location: 59860 - 60792 (-)
Gene ID: HRGMv2_2496_5_62
Type: pfam
Location: 60903 - 62222 (+)
Type: pfam
Location: 60903 - 62222 (+)
Gene ID: HRGMv2_2496_5_64
Type: pfam
Location: 63229 - 64734 (+)
Type: pfam
Location: 63229 - 64734 (+)
Gene ID: HRGMv2_2496_5_65
Type: pfam
Location: 64737 - 65741 (+)
Type: pfam
Location: 64737 - 65741 (+)
Gene ID: HRGMv2_2496_5_68
Type: CAZyme
Location: 68164 - 69843 (+)
Type: CAZyme
Location: 68164 - 69843 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Lactococcus
Species
Lactococcus cremoris
Gene Composition
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