Cluster: PUL0402_HRGMv2_2495_C0
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate: xylan
- Genome ID: HRGMv2_2495
- CGC Family ID: CGCFAM_02289
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0402_HRGMv2_2495_C0 | HRGMv2_2495_1_77 | 88485 | 90164 | - | CBM91 | GH43_11 |
| TC | PUL0402_HRGMv2_2495_C0 | HRGMv2_2495_1_78 | 90189 | 91661 | - | 2.A.2.3.2 |
| pfam | PUL0402_HRGMv2_2495_C0 | HRGMv2_2495_1_79 | 91727 | 92731 | - | Aldose_epim |
| pfam | PUL0402_HRGMv2_2495_C0 | HRGMv2_2495_1_80 | 92734 | 94239 | - | FGGY_N | FGGY_C |
| pfam | PUL0402_HRGMv2_2495_C0 | HRGMv2_2495_1_81 | 94306 | 95625 | - | AP_endonuc_2 |
Gene ID: HRGMv2_2495_1_77
Type: CAZyme
Location: 88485 - 90164 (-)
Type: CAZyme
Location: 88485 - 90164 (-)
Gene ID: HRGMv2_2495_1_78
Type: TC
Location: 90189 - 91661 (-)
Type: TC
Location: 90189 - 91661 (-)
Gene ID: HRGMv2_2495_1_79
Type: pfam
Location: 91727 - 92731 (-)
Type: pfam
Location: 91727 - 92731 (-)
Gene ID: HRGMv2_2495_1_80
Type: pfam
Location: 92734 - 94239 (-)
Type: pfam
Location: 92734 - 94239 (-)
Gene ID: HRGMv2_2495_1_81
Type: pfam
Location: 94306 - 95625 (-)
Type: pfam
Location: 94306 - 95625 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Lactococcus
Species
Lactococcus lactis
Gene Composition
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