Cluster: PUL0392_CGMR062874_C1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate: xylan
- Genome ID: CGMR062874
- CGC Family ID: CGCFAM_02273
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0392_CGMR062874_C1 | k141_105129_10 | 17081 | 18727 | + | CE20 | CE20 |
| TC | PUL0392_CGMR062874_C1 | k141_105129_11 | 18750 | 20234 | + | 2.A.2.3.6 |
| CAZyme | PUL0392_CGMR062874_C1 | k141_105129_14 | 22460 | 24601 | + | GH67 |
| TF | PUL0392_CGMR062874_C1 | k141_105129_17 | 28615 | 29118 | + | GerE |
| TC | PUL0392_CGMR062874_C1 | k141_105129_19 | 30270 | 33863 | + | 1.B.14.6.1 |
| pfam | PUL0392_CGMR062874_C1 | k141_105129_20 | 33885 | 35312 | + | SusD_RagB | SusD-like_3 |
| pfam | PUL0392_CGMR062874_C1 | k141_105129_21 | 35329 | 37818 | + | DUF4953 | DUF5117 | DUF5118 |
Gene ID: k141_105129_10
Type: CAZyme
Location: 17081 - 18727 (+)
Type: CAZyme
Location: 17081 - 18727 (+)
Gene ID: k141_105129_11
Type: TC
Location: 18750 - 20234 (+)
Type: TC
Location: 18750 - 20234 (+)
Gene ID: k141_105129_14
Type: CAZyme
Location: 22460 - 24601 (+)
Type: CAZyme
Location: 22460 - 24601 (+)
Gene ID: k141_105129_17
Type: TF
Location: 28615 - 29118 (+)
Type: TF
Location: 28615 - 29118 (+)
Gene ID: k141_105129_19
Type: TC
Location: 30270 - 33863 (+)
Type: TC
Location: 30270 - 33863 (+)
Gene ID: k141_105129_20
Type: pfam
Location: 33885 - 35312 (+)
Type: pfam
Location: 33885 - 35312 (+)
Gene ID: k141_105129_21
Type: pfam
Location: 35329 - 37818 (+)
Type: pfam
Location: 35329 - 37818 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Composition
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