Cluster: PUL0381_Rep_790_C0
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate: chitin
- Genome ID: Rep_790
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| pfam | PUL0381_Rep_790_C0 | Rep_790_c_1_169 | 212651 | 213409 | - | YdjC |
| CAZyme | PUL0381_Rep_790_C0 | Rep_790_c_1_170 | 213432 | 214754 | - | GH4 |
| TC | PUL0381_Rep_790_C0 | Rep_790_c_1_171 | 214736 | 215071 | - | 4.A.3.2.6 |
| TC | PUL0381_Rep_790_C0 | Rep_790_c_1_172 | 215118 | 216449 | - | 4.A.3.2.6 |
| TC | PUL0381_Rep_790_C0 | Rep_790_c_1_173 | 216537 | 216842 | - | 4.A.3.2.6 |
| CAZyme | PUL0381_Rep_790_C0 | Rep_790_c_1_174 | 217097 | 218380 | + | CE4 |
Gene ID: Rep_790_c_1_169
Type: pfam
Location: 212651 - 213409 (-)
Type: pfam
Location: 212651 - 213409 (-)
Gene ID: Rep_790_c_1_170
Type: CAZyme
Location: 213432 - 214754 (-)
Type: CAZyme
Location: 213432 - 214754 (-)
Gene ID: Rep_790_c_1_171
Type: TC
Location: 214736 - 215071 (-)
Type: TC
Location: 214736 - 215071 (-)
Gene ID: Rep_790_c_1_172
Type: TC
Location: 215118 - 216449 (-)
Type: TC
Location: 215118 - 216449 (-)
Gene ID: Rep_790_c_1_173
Type: TC
Location: 216537 - 216842 (-)
Type: TC
Location: 216537 - 216842 (-)
Gene ID: Rep_790_c_1_174
Type: CAZyme
Location: 217097 - 218380 (+)
Type: CAZyme
Location: 217097 - 218380 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Vibrionaceae
Genus
Vibrio
Species
Vibrio cholerae
Gene Composition
Loading chart...
← Back to Cluster List