Cluster: PUL0306_SPMP06_bin.48_C2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate: pectin
- Genome ID: SPMP06_bin.48
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0306_SPMP06_bin.48_C2 | opera_contig_191945_30 | 37405 | 39846 | - | GH2 |
| CAZyme | PUL0306_SPMP06_bin.48_C2 | opera_contig_191945_31 | 39853 | 40947 | - | GH53 |
| TC | PUL0306_SPMP06_bin.48_C2 | opera_contig_191945_33 | 42748 | 44325 | - | 8.A.46.1.1 |
| TC | PUL0306_SPMP06_bin.48_C2 | opera_contig_191945_34 | 44349 | 47324 | - | 1.B.14.6.1 |
| CAZyme | PUL0306_SPMP06_bin.48_C2 | opera_contig_191945_35 | 47394 | 50000 | - | GH147 |
| TF | PUL0306_SPMP06_bin.48_C2 | opera_contig_191945_36 | 50571 | 54116 | - | HTH_AraC | HTH_AraC |
Gene ID: opera_contig_191945_30
Type: CAZyme
Location: 37405 - 39846 (-)
Type: CAZyme
Location: 37405 - 39846 (-)
Gene ID: opera_contig_191945_31
Type: CAZyme
Location: 39853 - 40947 (-)
Type: CAZyme
Location: 39853 - 40947 (-)
Gene ID: opera_contig_191945_33
Type: TC
Location: 42748 - 44325 (-)
Type: TC
Location: 42748 - 44325 (-)
Gene ID: opera_contig_191945_34
Type: TC
Location: 44349 - 47324 (-)
Type: TC
Location: 44349 - 47324 (-)
Gene ID: opera_contig_191945_35
Type: CAZyme
Location: 47394 - 50000 (-)
Type: CAZyme
Location: 47394 - 50000 (-)
Gene ID: opera_contig_191945_36
Type: TF
Location: 50571 - 54116 (-)
Type: TF
Location: 50571 - 54116 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides caccae
Gene Composition
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