Cluster: PUL0294_C46.CMAG_1_C0
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate: xylan
- Genome ID: C46.CMAG_1
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| pfam | PUL0294_C46.CMAG_1_C0 | C46_contig_1457_1189 | 1450260 | 1451609 | + | AP_endonuc_2 |
| pfam | PUL0294_C46.CMAG_1_C0 | C46_contig_1457_1190 | 1451966 | 1453165 | + | Fe-ADH | Fe-ADH_2 | ADH_Fe_C |
| TF | PUL0294_C46.CMAG_1_C0 | C46_contig_1457_1191 | 1453174 | 1454214 | - | LacI |
| TC | PUL0294_C46.CMAG_1_C0 | C46_contig_1457_1192 | 1454552 | 1455865 | + | 3.A.1.1.21 |
| TC | PUL0294_C46.CMAG_1_C0 | C46_contig_1457_1193 | 1455959 | 1457011 | + | 3.A.1.1.25 |
| TC | PUL0294_C46.CMAG_1_C0 | C46_contig_1457_1194 | 1457008 | 1457904 | + | 3.A.1.1.25 |
| CAZyme | PUL0294_C46.CMAG_1_C0 | C46_contig_1457_1195 | 1458019 | 1459638 | + | CBM91 | GH43_11 |
| CAZyme | PUL0294_C46.CMAG_1_C0 | C46_contig_1457_1196 | 1459715 | 1461487 | + | GH43_12 |
| pfam | PUL0294_C46.CMAG_1_C0 | C46_contig_1457_1197 | 1461560 | 1462192 | + | Hexapep | Hexapep_2 | Hexapep_2 |
| CAZyme | PUL0294_C46.CMAG_1_C0 | C46_contig_1457_1198 | 1462256 | 1464235 | + | GH120 |
| NULL(UNKNOWN) | PUL0294_C46.CMAG_1_C0 | C46_contig_1457_1199 | 1464426 | 1464608 | + | NULL(UNKNOWN) |
| NULL(UNKNOWN) | PUL0294_C46.CMAG_1_C0 | C46_contig_1457_1200 | 1464871 | 1465215 | - | NULL(UNKNOWN) |
Gene ID: C46_contig_1457_1189
Type: pfam
Location: 1450260 - 1451609 (+)
Type: pfam
Location: 1450260 - 1451609 (+)
Gene ID: C46_contig_1457_1190
Type: pfam
Location: 1451966 - 1453165 (+)
Type: pfam
Location: 1451966 - 1453165 (+)
Gene ID: C46_contig_1457_1191
Type: TF
Location: 1453174 - 1454214 (-)
Type: TF
Location: 1453174 - 1454214 (-)
Gene ID: C46_contig_1457_1192
Type: TC
Location: 1454552 - 1455865 (+)
Type: TC
Location: 1454552 - 1455865 (+)
Gene ID: C46_contig_1457_1193
Type: TC
Location: 1455959 - 1457011 (+)
Type: TC
Location: 1455959 - 1457011 (+)
Gene ID: C46_contig_1457_1194
Type: TC
Location: 1457008 - 1457904 (+)
Type: TC
Location: 1457008 - 1457904 (+)
Gene ID: C46_contig_1457_1195
Type: CAZyme
Location: 1458019 - 1459638 (+)
Type: CAZyme
Location: 1458019 - 1459638 (+)
Gene ID: C46_contig_1457_1196
Type: CAZyme
Location: 1459715 - 1461487 (+)
Type: CAZyme
Location: 1459715 - 1461487 (+)
Gene ID: C46_contig_1457_1197
Type: pfam
Location: 1461560 - 1462192 (+)
Type: pfam
Location: 1461560 - 1462192 (+)
Gene ID: C46_contig_1457_1198
Type: CAZyme
Location: 1462256 - 1464235 (+)
Type: CAZyme
Location: 1462256 - 1464235 (+)
Gene ID: C46_contig_1457_1199
Type: null
Location: 1464426 - 1464608 (+)
Type: null
Location: 1464426 - 1464608 (+)
Gene ID: C46_contig_1457_1200
Type: null
Location: 1464871 - 1465215 (-)
Type: null
Location: 1464871 - 1465215 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium longum
Gene Composition
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