Cluster: PUL0291_HRGMv2_1814_C7
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate: host glycan
- Genome ID: HRGMv2_1814
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | PUL0291_HRGMv2_1814_C7 | HRGMv2_1814_4_16 | 18083 | 18775 | - | 1.B.35.2.2 |
| TC | PUL0291_HRGMv2_1814_C7 | HRGMv2_1814_4_17 | 18864 | 20258 | - | 2.A.2.3.9 |
| TC | PUL0291_HRGMv2_1814_C7 | HRGMv2_1814_4_18 | 20304 | 21686 | - | 2.A.2.3.9 |
| CAZyme | PUL0291_HRGMv2_1814_C7 | HRGMv2_1814_4_19 | 21732 | 23756 | - | GH31_13 |
| pfam | PUL0291_HRGMv2_1814_C7 | HRGMv2_1814_4_20 | 23867 | 25108 | - | GlcNAc_2-epim |
| pfam | PUL0291_HRGMv2_1814_C7 | HRGMv2_1814_4_21 | 25124 | 26002 | - | DeoC |
| pfam | PUL0291_HRGMv2_1814_C7 | HRGMv2_1814_4_22 | 26025 | 26921 | - | NAD_binding_2 | F420_oxidored | NAD_binding_11 |
| STP | PUL0291_HRGMv2_1814_C7 | HRGMv2_1814_4_23 | 27088 | 27984 | + | PfkB |
| TF | PUL0291_HRGMv2_1814_C7 | HRGMv2_1814_4_24 | 28017 | 28820 | + | HTH_DeoR |
Gene ID: HRGMv2_1814_4_16
Type: TC
Location: 18083 - 18775 (-)
Type: TC
Location: 18083 - 18775 (-)
Gene ID: HRGMv2_1814_4_17
Type: TC
Location: 18864 - 20258 (-)
Type: TC
Location: 18864 - 20258 (-)
Gene ID: HRGMv2_1814_4_18
Type: TC
Location: 20304 - 21686 (-)
Type: TC
Location: 20304 - 21686 (-)
Gene ID: HRGMv2_1814_4_19
Type: CAZyme
Location: 21732 - 23756 (-)
Type: CAZyme
Location: 21732 - 23756 (-)
Gene ID: HRGMv2_1814_4_20
Type: pfam
Location: 23867 - 25108 (-)
Type: pfam
Location: 23867 - 25108 (-)
Gene ID: HRGMv2_1814_4_21
Type: pfam
Location: 25124 - 26002 (-)
Type: pfam
Location: 25124 - 26002 (-)
Gene ID: HRGMv2_1814_4_22
Type: pfam
Location: 26025 - 26921 (-)
Type: pfam
Location: 26025 - 26921 (-)
Gene ID: HRGMv2_1814_4_23
Type: STP
Location: 27088 - 27984 (+)
Type: STP
Location: 27088 - 27984 (+)
Gene ID: HRGMv2_1814_4_24
Type: TF
Location: 28017 - 28820 (+)
Type: TF
Location: 28017 - 28820 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter_B
Species
Citrobacter_B koseri
Gene Composition
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