Cluster: PUL0291_HRGMv2_1797_C5
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate: host glycan
- Genome ID: HRGMv2_1797
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TF | PUL0291_HRGMv2_1797_C5 | HRGMv2_1797_15_101 | 105614 | 106417 | - | HTH_DeoR |
| STP | PUL0291_HRGMv2_1797_C5 | HRGMv2_1797_15_102 | 106451 | 107347 | - | PfkB |
| pfam | PUL0291_HRGMv2_1797_C5 | HRGMv2_1797_15_103 | 107514 | 108410 | + | NAD_binding_2 | F420_oxidored | NAD_binding_11 |
| pfam | PUL0291_HRGMv2_1797_C5 | HRGMv2_1797_15_104 | 108421 | 109299 | + | DeoC |
| pfam | PUL0291_HRGMv2_1797_C5 | HRGMv2_1797_15_105 | 109315 | 110556 | + | GlcNAc_2-epim |
| CAZyme | PUL0291_HRGMv2_1797_C5 | HRGMv2_1797_15_108 | 112618 | 114654 | + | GH31_13 |
| TC | PUL0291_HRGMv2_1797_C5 | HRGMv2_1797_15_109 | 114700 | 116082 | + | 2.A.2.3.9 |
| TC | PUL0291_HRGMv2_1797_C5 | HRGMv2_1797_15_110 | 116128 | 117546 | + | 2.A.2.3.9 |
| TC | PUL0291_HRGMv2_1797_C5 | HRGMv2_1797_15_111 | 117613 | 118305 | + | 1.B.35.2.2 |
Gene ID: HRGMv2_1797_15_101
Type: TF
Location: 105614 - 106417 (-)
Type: TF
Location: 105614 - 106417 (-)
Gene ID: HRGMv2_1797_15_102
Type: STP
Location: 106451 - 107347 (-)
Type: STP
Location: 106451 - 107347 (-)
Gene ID: HRGMv2_1797_15_103
Type: pfam
Location: 107514 - 108410 (+)
Type: pfam
Location: 107514 - 108410 (+)
Gene ID: HRGMv2_1797_15_104
Type: pfam
Location: 108421 - 109299 (+)
Type: pfam
Location: 108421 - 109299 (+)
Gene ID: HRGMv2_1797_15_105
Type: pfam
Location: 109315 - 110556 (+)
Type: pfam
Location: 109315 - 110556 (+)
Gene ID: HRGMv2_1797_15_108
Type: CAZyme
Location: 112618 - 114654 (+)
Type: CAZyme
Location: 112618 - 114654 (+)
Gene ID: HRGMv2_1797_15_109
Type: TC
Location: 114700 - 116082 (+)
Type: TC
Location: 114700 - 116082 (+)
Gene ID: HRGMv2_1797_15_110
Type: TC
Location: 116128 - 117546 (+)
Type: TC
Location: 116128 - 117546 (+)
Gene ID: HRGMv2_1797_15_111
Type: TC
Location: 117613 - 118305 (+)
Type: TC
Location: 117613 - 118305 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Species
Citrobacter europaeus
Gene Composition
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