Cluster: PUL0285_C46.CMAG_1_C1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate: beta-mannan
- Genome ID: C46.CMAG_1
- CGC Family ID: CGCFAM_00819
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0285_C46.CMAG_1_C1 | C46_contig_1457_264 | 287484 | 289559 | - | GH42 |
| TC | PUL0285_C46.CMAG_1_C1 | C46_contig_1457_266 | 289751 | 290758 | - | 3.A.1.1.48 |
| TC | PUL0285_C46.CMAG_1_C1 | C46_contig_1457_267 | 290814 | 291740 | - | 3.A.1.1.48 |
| TF | PUL0285_C46.CMAG_1_C1 | C46_contig_1457_268 | 291962 | 292972 | + | LacI |
| pfam | PUL0285_C46.CMAG_1_C1 | C46_contig_1457_269 | 293275 | 294009 | - | PseudoU_synth_2 |
Gene ID: C46_contig_1457_264
Type: CAZyme
Location: 287484 - 289559 (-)
Type: CAZyme
Location: 287484 - 289559 (-)
Gene ID: C46_contig_1457_266
Type: TC
Location: 289751 - 290758 (-)
Type: TC
Location: 289751 - 290758 (-)
Gene ID: C46_contig_1457_267
Type: TC
Location: 290814 - 291740 (-)
Type: TC
Location: 290814 - 291740 (-)
Gene ID: C46_contig_1457_268
Type: TF
Location: 291962 - 292972 (+)
Type: TF
Location: 291962 - 292972 (+)
Gene ID: C46_contig_1457_269
Type: pfam
Location: 293275 - 294009 (-)
Type: pfam
Location: 293275 - 294009 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium longum
Gene Composition
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