Cluster: PUL0267_HRGMv2_2527_C2
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate: alpha-glucan
- Genome ID: HRGMv2_2527
- CGC Family ID: CGCFAM_04151
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| pfam | PUL0267_HRGMv2_2527_C2 | HRGMv2_2527_23_9 | 8540 | 11380 | - | UvrA_DNA-bind | UvrA_inter |
| pfam | PUL0267_HRGMv2_2527_C2 | HRGMv2_2527_23_10 | 11370 | 13418 | - | Helicase_C | UVR | ResIII | UvrB | UvrB_inter |
| pfam | PUL0267_HRGMv2_2527_C2 | HRGMv2_2527_23_11 | 13519 | 15243 | - | PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| CAZyme | PUL0267_HRGMv2_2527_C2 | HRGMv2_2527_23_13 | 17145 | 19589 | - | GT35 |
| CAZyme | PUL0267_HRGMv2_2527_C2 | HRGMv2_2527_23_14 | 19582 | 21012 | - | GT5 |
| pfam | PUL0267_HRGMv2_2527_C2 | HRGMv2_2527_23_16 | 22155 | 23300 | - | Hexapep | NTP_transferase | NTP_transf_3 | Hexapep_GlmU |
| CAZyme | PUL0267_HRGMv2_2527_C2 | HRGMv2_2527_23_17 | 23312 | 25219 | - | CBM48 | GH13_9 |
| STP | PUL0267_HRGMv2_2527_C2 | HRGMv2_2527_23_18 | 25401 | 26330 | - | Pyr_redox_2 |
Gene ID: HRGMv2_2527_23_9
Type: pfam
Location: 8540 - 11380 (-)
Type: pfam
Location: 8540 - 11380 (-)
Gene ID: HRGMv2_2527_23_10
Type: pfam
Location: 11370 - 13418 (-)
Type: pfam
Location: 11370 - 13418 (-)
Gene ID: HRGMv2_2527_23_11
Type: pfam
Location: 13519 - 15243 (-)
Type: pfam
Location: 13519 - 15243 (-)
Gene ID: HRGMv2_2527_23_13
Type: CAZyme
Location: 17145 - 19589 (-)
Type: CAZyme
Location: 17145 - 19589 (-)
Gene ID: HRGMv2_2527_23_14
Type: CAZyme
Location: 19582 - 21012 (-)
Type: CAZyme
Location: 19582 - 21012 (-)
Gene ID: HRGMv2_2527_23_16
Type: pfam
Location: 22155 - 23300 (-)
Type: pfam
Location: 22155 - 23300 (-)
Gene ID: HRGMv2_2527_23_17
Type: CAZyme
Location: 23312 - 25219 (-)
Type: CAZyme
Location: 23312 - 25219 (-)
Gene ID: HRGMv2_2527_23_18
Type: STP
Location: 25401 - 26330 (-)
Type: STP
Location: 25401 - 26330 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactobacillus
Species
Lactobacillus amylovorus
Gene Composition
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