Cluster: PUL0232_C46.CMAG_1_C0
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: galactan
- Genome ID: C46.CMAG_1
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| pfam | PUL0232_C46.CMAG_1_C0 | C46_contig_1457_765 | 927071 | 927520 | + | dCMP_cyt_deam_1 | MafB19-deam |
| CAZyme | PUL0232_C46.CMAG_1_C0 | C46_contig_1457_766 | 927640 | 929946 | + | GH36 |
| TF | PUL0232_C46.CMAG_1_C0 | C46_contig_1457_767 | 930111 | 931319 | - | MarR |
| STP | PUL0232_C46.CMAG_1_C0 | C46_contig_1457_768 | 931493 | 932782 | + | SBP_bac_1 |
| TC | PUL0232_C46.CMAG_1_C0 | C46_contig_1457_769 | 932804 | 933733 | + | 3.A.1.1.28 |
| TC | PUL0232_C46.CMAG_1_C0 | C46_contig_1457_770 | 933752 | 934618 | + | 3.A.1.1.28 |
Gene ID: C46_contig_1457_765
Type: pfam
Location: 927071 - 927520 (+)
Type: pfam
Location: 927071 - 927520 (+)
Gene ID: C46_contig_1457_766
Type: CAZyme
Location: 927640 - 929946 (+)
Type: CAZyme
Location: 927640 - 929946 (+)
Gene ID: C46_contig_1457_767
Type: TF
Location: 930111 - 931319 (-)
Type: TF
Location: 930111 - 931319 (-)
Gene ID: C46_contig_1457_768
Type: STP
Location: 931493 - 932782 (+)
Type: STP
Location: 931493 - 932782 (+)
Gene ID: C46_contig_1457_769
Type: TC
Location: 932804 - 933733 (+)
Type: TC
Location: 932804 - 933733 (+)
Gene ID: C46_contig_1457_770
Type: TC
Location: 933752 - 934618 (+)
Type: TC
Location: 933752 - 934618 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium longum
Gene Composition
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