Cluster: PUL0230_CGMR007519_C1
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate: alpha-glucan
- Genome ID: CGMR007519
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| pfam | PUL0230_CGMR007519_C1 | k141_24923_2 | 1985 | 2758 | + | Y_phosphatase3 |
| TF | PUL0230_CGMR007519_C1 | k141_24923_3 | 2767 | 3717 | + | LacI |
| pfam | PUL0230_CGMR007519_C1 | k141_24923_4 | 3858 | 5033 | + | Acetate_kinase |
| CAZyme | PUL0230_CGMR007519_C1 | k141_24923_5 | 5145 | 6800 | + | GH13_31 |
| CAZyme | PUL0230_CGMR007519_C1 | k141_24923_6 | 6804 | 8525 | + | CBM34 | GH13_20 |
| CAZyme | PUL0230_CGMR007519_C1 | k141_24923_7 | 8696 | 10966 | + | GH65 |
| pfam | PUL0230_CGMR007519_C1 | k141_24923_8 | 10951 | 11616 | + | Hydrolase | HAD_2 |
| TC | PUL0230_CGMR007519_C1 | k141_24923_9 | 11642 | 12748 | + | 3.A.1.1.20 |
| TC | PUL0230_CGMR007519_C1 | k141_24923_10 | 12835 | 14061 | + | 3.A.1.1.27 |
| TC | PUL0230_CGMR007519_C1 | k141_24923_11 | 14132 | 15490 | + | 3.A.1.1.27 |
| TC | PUL0230_CGMR007519_C1 | k141_24923_12 | 15493 | 16350 | + | 3.A.1.1.27 |
Gene ID: k141_24923_2
Type: pfam
Location: 1985 - 2758 (+)
Type: pfam
Location: 1985 - 2758 (+)
Gene ID: k141_24923_3
Type: TF
Location: 2767 - 3717 (+)
Type: TF
Location: 2767 - 3717 (+)
Gene ID: k141_24923_4
Type: pfam
Location: 3858 - 5033 (+)
Type: pfam
Location: 3858 - 5033 (+)
Gene ID: k141_24923_5
Type: CAZyme
Location: 5145 - 6800 (+)
Type: CAZyme
Location: 5145 - 6800 (+)
Gene ID: k141_24923_6
Type: CAZyme
Location: 6804 - 8525 (+)
Type: CAZyme
Location: 6804 - 8525 (+)
Gene ID: k141_24923_7
Type: CAZyme
Location: 8696 - 10966 (+)
Type: CAZyme
Location: 8696 - 10966 (+)
Gene ID: k141_24923_8
Type: pfam
Location: 10951 - 11616 (+)
Type: pfam
Location: 10951 - 11616 (+)
Gene ID: k141_24923_9
Type: TC
Location: 11642 - 12748 (+)
Type: TC
Location: 11642 - 12748 (+)
Gene ID: k141_24923_10
Type: TC
Location: 12835 - 14061 (+)
Type: TC
Location: 12835 - 14061 (+)
Gene ID: k141_24923_11
Type: TC
Location: 14132 - 15490 (+)
Type: TC
Location: 14132 - 15490 (+)
Gene ID: k141_24923_12
Type: TC
Location: 15493 - 16350 (+)
Type: TC
Location: 15493 - 16350 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactobacillus
Species
Lactobacillus acidophilus
Gene Composition
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