Cluster: PUL0214_Rep_842_C1
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate: galactan
- Genome ID: Rep_842
- CGC Family ID: CGCFAM_04146
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | PUL0214_Rep_842_C1 | Rep_842_c_0_599 | 778351 | 782382 | + | 3.A.1.106.12 |
| pfam | PUL0214_Rep_842_C1 | Rep_842_c_0_600 | 782807 | 783682 | + | SOR_SNZ | ThiG |
| peptidase | PUL0214_Rep_842_C1 | Rep_842_c_0_601 | 783821 | 784525 | + | C26.A32 |
| STP | PUL0214_Rep_842_C1 | Rep_842_c_0_602 | 785103 | 786353 | + | SBP_bac_1 |
| TC | PUL0214_Rep_842_C1 | Rep_842_c_0_603 | 786545 | 787417 | + | 3.A.1.1.20 |
| TC | PUL0214_Rep_842_C1 | Rep_842_c_0_604 | 787414 | 788247 | + | 3.A.1.1.39 |
| CAZyme | PUL0214_Rep_842_C1 | Rep_842_c_0_605 | 788289 | 790544 | + | GH35 |
| CAZyme | PUL0214_Rep_842_C1 | Rep_842_c_0_606 | 790600 | 792702 | + | GH42 |
| TF | PUL0214_Rep_842_C1 | Rep_842_c_0_607 | 792747 | 793820 | + | LacI |
Gene ID: Rep_842_c_0_599
Type: TC
Location: 778351 - 782382 (+)
Type: TC
Location: 778351 - 782382 (+)
Gene ID: Rep_842_c_0_600
Type: pfam
Location: 782807 - 783682 (+)
Type: pfam
Location: 782807 - 783682 (+)
Gene ID: Rep_842_c_0_601
Type: peptidase
Location: 783821 - 784525 (+)
Type: peptidase
Location: 783821 - 784525 (+)
Gene ID: Rep_842_c_0_602
Type: STP
Location: 785103 - 786353 (+)
Type: STP
Location: 785103 - 786353 (+)
Gene ID: Rep_842_c_0_603
Type: TC
Location: 786545 - 787417 (+)
Type: TC
Location: 786545 - 787417 (+)
Gene ID: Rep_842_c_0_604
Type: TC
Location: 787414 - 788247 (+)
Type: TC
Location: 787414 - 788247 (+)
Gene ID: Rep_842_c_0_605
Type: CAZyme
Location: 788289 - 790544 (+)
Type: CAZyme
Location: 788289 - 790544 (+)
Gene ID: Rep_842_c_0_606
Type: CAZyme
Location: 790600 - 792702 (+)
Type: CAZyme
Location: 790600 - 792702 (+)
Gene ID: Rep_842_c_0_607
Type: TF
Location: 792747 - 793820 (+)
Type: TF
Location: 792747 - 793820 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium adolescentis
Gene Composition
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