Cluster: PUL0196_CGMR087432_C1
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 3
- Substrate: host glycan
- Genome ID: CGMR087432
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | PUL0196_CGMR087432_C1 | k141_31110_4 | 2077 | 2457 | - | 4.A.6.1.18 |
| TC | PUL0196_CGMR087432_C1 | k141_31110_5 | 2494 | 3315 | - | 4.A.6.1.18 |
| TC | PUL0196_CGMR087432_C1 | k141_31110_6 | 3302 | 4219 | - | 4.A.6.1.18 |
| TC | PUL0196_CGMR087432_C1 | k141_31110_7 | 4232 | 4714 | - | 4.A.6.1.18 |
| CAZyme | PUL0196_CGMR087432_C1 | k141_31110_8 | 4717 | 6513 | - | GH35 |
| CAZyme | PUL0196_CGMR087432_C1 | k141_31110_9 | 6613 | 7773 | - | CE9 |
| STP | PUL0196_CGMR087432_C1 | k141_31110_10 | 7832 | 9013 | - | SIS | SIS |
| TF | PUL0196_CGMR087432_C1 | k141_31110_11 | 9082 | 9798 | - | GntR |
| pfam | PUL0196_CGMR087432_C1 | k141_31110_12 | 10160 | 11179 | - | PMI_typeI_cat | MPI_cupin_dom |
| CAZyme | PUL0196_CGMR087432_C1 | k141_31110_13 | 11560 | 13269 | - | GH20 |
Gene ID: k141_31110_4
Type: TC
Location: 2077 - 2457 (-)
Type: TC
Location: 2077 - 2457 (-)
Gene ID: k141_31110_5
Type: TC
Location: 2494 - 3315 (-)
Type: TC
Location: 2494 - 3315 (-)
Gene ID: k141_31110_6
Type: TC
Location: 3302 - 4219 (-)
Type: TC
Location: 3302 - 4219 (-)
Gene ID: k141_31110_7
Type: TC
Location: 4232 - 4714 (-)
Type: TC
Location: 4232 - 4714 (-)
Gene ID: k141_31110_8
Type: CAZyme
Location: 4717 - 6513 (-)
Type: CAZyme
Location: 4717 - 6513 (-)
Gene ID: k141_31110_9
Type: CAZyme
Location: 6613 - 7773 (-)
Type: CAZyme
Location: 6613 - 7773 (-)
Gene ID: k141_31110_10
Type: STP
Location: 7832 - 9013 (-)
Type: STP
Location: 7832 - 9013 (-)
Gene ID: k141_31110_11
Type: TF
Location: 9082 - 9798 (-)
Type: TF
Location: 9082 - 9798 (-)
Gene ID: k141_31110_12
Type: pfam
Location: 10160 - 11179 (-)
Type: pfam
Location: 10160 - 11179 (-)
Gene ID: k141_31110_13
Type: CAZyme
Location: 11560 - 13269 (-)
Type: CAZyme
Location: 11560 - 13269 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lacticaseibacillus
Species
Lacticaseibacillus paracasei
Gene Composition
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