Cluster: PUL0194_HRGMv2_2533_C11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 5
- Substrate: host glycan
- Genome ID: HRGMv2_2533
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0194_HRGMv2_2533_C11 | HRGMv2_2533_28_2 | 1334 | 3016 | + | GH29 |
| CAZyme | PUL0194_HRGMv2_2533_C11 | HRGMv2_2533_28_3 | 3062 | 5146 | - | GH92 |
| CAZyme | PUL0194_HRGMv2_2533_C11 | HRGMv2_2533_28_4 | 5317 | 6597 | + | GH125 |
| CAZyme | PUL0194_HRGMv2_2533_C11 | HRGMv2_2533_28_5 | 6808 | 9453 | + | GH38 |
| pfam | PUL0194_HRGMv2_2533_C11 | HRGMv2_2533_28_6 | 9538 | 10407 | + | ROK |
| CAZyme | PUL0194_HRGMv2_2533_C11 | HRGMv2_2533_28_7 | 10401 | 12281 | + | GH20 |
Gene ID: HRGMv2_2533_28_2
Type: CAZyme
Location: 1334 - 3016 (+)
Type: CAZyme
Location: 1334 - 3016 (+)
Gene ID: HRGMv2_2533_28_3
Type: CAZyme
Location: 3062 - 5146 (-)
Type: CAZyme
Location: 3062 - 5146 (-)
Gene ID: HRGMv2_2533_28_4
Type: CAZyme
Location: 5317 - 6597 (+)
Type: CAZyme
Location: 5317 - 6597 (+)
Gene ID: HRGMv2_2533_28_5
Type: CAZyme
Location: 6808 - 9453 (+)
Type: CAZyme
Location: 6808 - 9453 (+)
Gene ID: HRGMv2_2533_28_6
Type: pfam
Location: 9538 - 10407 (+)
Type: pfam
Location: 9538 - 10407 (+)
Gene ID: HRGMv2_2533_28_7
Type: CAZyme
Location: 10401 - 12281 (+)
Type: CAZyme
Location: 10401 - 12281 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus mitis_CY
Gene Composition
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