Cluster: PUL0194_HRGMv2_2532_C9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 5
- Substrate: host glycan
- Genome ID: HRGMv2_2532
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0194_HRGMv2_2532_C9 | HRGMv2_2532_5_37 | 35074 | 36954 | - | GH20 |
| pfam | PUL0194_HRGMv2_2532_C9 | HRGMv2_2532_5_38 | 36948 | 37829 | - | ROK |
| CAZyme | PUL0194_HRGMv2_2532_C9 | HRGMv2_2532_5_39 | 37901 | 40546 | - | GH38 |
| CAZyme | PUL0194_HRGMv2_2532_C9 | HRGMv2_2532_5_40 | 40623 | 41903 | - | GH125 |
| CAZyme | PUL0194_HRGMv2_2532_C9 | HRGMv2_2532_5_41 | 42074 | 44161 | + | GH92 |
| CAZyme | PUL0194_HRGMv2_2532_C9 | HRGMv2_2532_5_42 | 44200 | 45882 | - | GH29 |
Gene ID: HRGMv2_2532_5_37
Type: CAZyme
Location: 35074 - 36954 (-)
Type: CAZyme
Location: 35074 - 36954 (-)
Gene ID: HRGMv2_2532_5_38
Type: pfam
Location: 36948 - 37829 (-)
Type: pfam
Location: 36948 - 37829 (-)
Gene ID: HRGMv2_2532_5_39
Type: CAZyme
Location: 37901 - 40546 (-)
Type: CAZyme
Location: 37901 - 40546 (-)
Gene ID: HRGMv2_2532_5_40
Type: CAZyme
Location: 40623 - 41903 (-)
Type: CAZyme
Location: 40623 - 41903 (-)
Gene ID: HRGMv2_2532_5_41
Type: CAZyme
Location: 42074 - 44161 (+)
Type: CAZyme
Location: 42074 - 44161 (+)
Gene ID: HRGMv2_2532_5_42
Type: CAZyme
Location: 44200 - 45882 (-)
Type: CAZyme
Location: 44200 - 45882 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus pseudopneumoniae_E
Gene Composition
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