Cluster: PUL0190_HRGMv2_0159_C1
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 6
- Substrate: pectin
- Genome ID: HRGMv2_0159
- CGC Family ID: CGCFAM_00723
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0190_HRGMv2_0159_C1 | HRGMv2_0159_24_13 | 16155 | 17123 | - | GH43_29 |
| CAZyme | PUL0190_HRGMv2_0159_C1 | HRGMv2_0159_24_14 | 17120 | 19102 | - | GH51_2 |
| CAZyme | PUL0190_HRGMv2_0159_C1 | HRGMv2_0159_24_15 | 19131 | 20651 | - | GH43_4 |
| TC | PUL0190_HRGMv2_0159_C1 | HRGMv2_0159_24_18 | 25283 | 28546 | + | 1.B.14.6.1 |
| pfam | PUL0190_HRGMv2_0159_C1 | HRGMv2_0159_24_19 | 28586 | 30337 | + | SusD_RagB | SusD-like_3 |
| pfam | PUL0190_HRGMv2_0159_C1 | HRGMv2_0159_24_20 | 30370 | 32154 | + | Big_3 |
| CAZyme | PUL0190_HRGMv2_0159_C1 | HRGMv2_0159_24_21 | 32224 | 34152 | + | GH43_4 |
| sulfatase | PUL0190_HRGMv2_0159_C1 | HRGMv2_0159_24_22 | 34323 | 35462 | + | S1_22 |
| STP | PUL0190_HRGMv2_0159_C1 | HRGMv2_0159_24_24 | 37258 | 37935 | + | NUDIX |
| pfam | PUL0190_HRGMv2_0159_C1 | HRGMv2_0159_24_25 | 37941 | 38624 | + | Aldolase_II |
| pfam | PUL0190_HRGMv2_0159_C1 | HRGMv2_0159_24_26 | 38666 | 40195 | + | AraA_N | Arabinose_Iso_C | AraA_central |
| pfam | PUL0190_HRGMv2_0159_C1 | HRGMv2_0159_24_27 | 40302 | 41897 | + | FGGY_N | FGGY_C |
| CAZyme | PUL0190_HRGMv2_0159_C1 | HRGMv2_0159_24_28 | 42039 | 44441 | + | GH146 |
| CAZyme | PUL0190_HRGMv2_0159_C1 | HRGMv2_0159_24_29 | 44573 | 46117 | + | GH51_1 |
Gene ID: HRGMv2_0159_24_13
Type: CAZyme
Location: 16155 - 17123 (-)
Type: CAZyme
Location: 16155 - 17123 (-)
Gene ID: HRGMv2_0159_24_14
Type: CAZyme
Location: 17120 - 19102 (-)
Type: CAZyme
Location: 17120 - 19102 (-)
Gene ID: HRGMv2_0159_24_15
Type: CAZyme
Location: 19131 - 20651 (-)
Type: CAZyme
Location: 19131 - 20651 (-)
Gene ID: HRGMv2_0159_24_18
Type: TC
Location: 25283 - 28546 (+)
Type: TC
Location: 25283 - 28546 (+)
Gene ID: HRGMv2_0159_24_19
Type: pfam
Location: 28586 - 30337 (+)
Type: pfam
Location: 28586 - 30337 (+)
Gene ID: HRGMv2_0159_24_20
Type: pfam
Location: 30370 - 32154 (+)
Type: pfam
Location: 30370 - 32154 (+)
Gene ID: HRGMv2_0159_24_21
Type: CAZyme
Location: 32224 - 34152 (+)
Type: CAZyme
Location: 32224 - 34152 (+)
Gene ID: HRGMv2_0159_24_22
Type: sulfatase
Location: 34323 - 35462 (+)
Type: sulfatase
Location: 34323 - 35462 (+)
Gene ID: HRGMv2_0159_24_24
Type: STP
Location: 37258 - 37935 (+)
Type: STP
Location: 37258 - 37935 (+)
Gene ID: HRGMv2_0159_24_25
Type: pfam
Location: 37941 - 38624 (+)
Type: pfam
Location: 37941 - 38624 (+)
Gene ID: HRGMv2_0159_24_26
Type: pfam
Location: 38666 - 40195 (+)
Type: pfam
Location: 38666 - 40195 (+)
Gene ID: HRGMv2_0159_24_27
Type: pfam
Location: 40302 - 41897 (+)
Type: pfam
Location: 40302 - 41897 (+)
Gene ID: HRGMv2_0159_24_28
Type: CAZyme
Location: 42039 - 44441 (+)
Type: CAZyme
Location: 42039 - 44441 (+)
Gene ID: HRGMv2_0159_24_29
Type: CAZyme
Location: 44573 - 46117 (+)
Type: CAZyme
Location: 44573 - 46117 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Composition
Loading chart...
← Back to Cluster List