Cluster: PUL0180_C89.bin_3_C1
🧬 Cluster Details
- Gene Count: 19
- CAZyme Count: 3
- Substrate: beta-mannan
- Genome ID: C89.bin_3
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | PUL0180_C89.bin_3_C1 | C89_contig_31_833 | 1079595 | 1081046 | - | 2.A.38.1.1 |
| STP | PUL0180_C89.bin_3_C1 | C89_contig_31_834 | 1081051 | 1082391 | - | TrkA_C | TrkA_C |
| pfam | PUL0180_C89.bin_3_C1 | C89_contig_31_835 | 1082430 | 1084376 | - | TPP_enzyme_C | Transket_pyr | Transketolase_C | DXP_synthase_N |
| peptidase | PUL0180_C89.bin_3_C1 | C89_contig_31_836 | 1084875 | 1086218 | - | S09.UPC |
| NULL(UNKNOWN) | PUL0180_C89.bin_3_C1 | C89_contig_31_837 | 1086215 | 1086541 | - | NULL(UNKNOWN) |
| pfam | PUL0180_C89.bin_3_C1 | C89_contig_31_838 | 1086717 | 1087364 | + | Hydrolase | HAD | Hydrolase_like | HAD_2 |
| sulfatase | PUL0180_C89.bin_3_C1 | C89_contig_31_839 | 1087444 | 1089000 | - | S1_16 |
| CAZyme | PUL0180_C89.bin_3_C1 | C89_contig_31_840 | 1089021 | 1091096 | - | GH36 |
| CAZyme | PUL0180_C89.bin_3_C1 | C89_contig_31_841 | 1091106 | 1092488 | - | GH29 |
| sulfatase | PUL0180_C89.bin_3_C1 | C89_contig_31_842 | 1092491 | 1093942 | - | S1_27 |
| pfam | PUL0180_C89.bin_3_C1 | C89_contig_31_843 | 1094061 | 1096043 | - | SusD_RagB | SusD-like_3 |
| TC | PUL0180_C89.bin_3_C1 | C89_contig_31_844 | 1096056 | 1099217 | - | 1.B.14.6.1 |
| TF | PUL0180_C89.bin_3_C1 | C89_contig_31_845 | 1099427 | 1103512 | + | HTH_AraC | HTH_AraC |
| TC | PUL0180_C89.bin_3_C1 | C89_contig_31_846 | 1103679 | 1105124 | - | 2.A.1.14.25 |
| CAZyme | PUL0180_C89.bin_3_C1 | C89_contig_31_847 | 1105568 | 1106917 | + | GH29 |
| pfam | PUL0180_C89.bin_3_C1 | C89_contig_31_848 | 1106936 | 1108183 | + | N-glycanase_N | N-glycanase_C |
| pfam | PUL0180_C89.bin_3_C1 | C89_contig_31_849 | 1108503 | 1111964 | - | DEAD | ResIII | AAA_11 | AAA_11 | AAA_12 | AAA_19 | AAA_30 |
| TC | PUL0180_C89.bin_3_C1 | C89_contig_31_850 | 1112060 | 1113100 | - | 9.B.97.3.1 |
| TC | PUL0180_C89.bin_3_C1 | C89_contig_31_851 | 1113308 | 1114102 | - | 2.A.64.2.1 |
Gene ID: C89_contig_31_833
Type: TC
Location: 1079595 - 1081046 (-)
Type: TC
Location: 1079595 - 1081046 (-)
Gene ID: C89_contig_31_834
Type: STP
Location: 1081051 - 1082391 (-)
Type: STP
Location: 1081051 - 1082391 (-)
Gene ID: C89_contig_31_835
Type: pfam
Location: 1082430 - 1084376 (-)
Type: pfam
Location: 1082430 - 1084376 (-)
Gene ID: C89_contig_31_836
Type: peptidase
Location: 1084875 - 1086218 (-)
Type: peptidase
Location: 1084875 - 1086218 (-)
Gene ID: C89_contig_31_837
Type: null
Location: 1086215 - 1086541 (-)
Type: null
Location: 1086215 - 1086541 (-)
Gene ID: C89_contig_31_838
Type: pfam
Location: 1086717 - 1087364 (+)
Type: pfam
Location: 1086717 - 1087364 (+)
Gene ID: C89_contig_31_839
Type: sulfatase
Location: 1087444 - 1089000 (-)
Type: sulfatase
Location: 1087444 - 1089000 (-)
Gene ID: C89_contig_31_840
Type: CAZyme
Location: 1089021 - 1091096 (-)
Type: CAZyme
Location: 1089021 - 1091096 (-)
Gene ID: C89_contig_31_841
Type: CAZyme
Location: 1091106 - 1092488 (-)
Type: CAZyme
Location: 1091106 - 1092488 (-)
Gene ID: C89_contig_31_842
Type: sulfatase
Location: 1092491 - 1093942 (-)
Type: sulfatase
Location: 1092491 - 1093942 (-)
Gene ID: C89_contig_31_843
Type: pfam
Location: 1094061 - 1096043 (-)
Type: pfam
Location: 1094061 - 1096043 (-)
Gene ID: C89_contig_31_844
Type: TC
Location: 1096056 - 1099217 (-)
Type: TC
Location: 1096056 - 1099217 (-)
Gene ID: C89_contig_31_845
Type: TF
Location: 1099427 - 1103512 (+)
Type: TF
Location: 1099427 - 1103512 (+)
Gene ID: C89_contig_31_846
Type: TC
Location: 1103679 - 1105124 (-)
Type: TC
Location: 1103679 - 1105124 (-)
Gene ID: C89_contig_31_847
Type: CAZyme
Location: 1105568 - 1106917 (+)
Type: CAZyme
Location: 1105568 - 1106917 (+)
Gene ID: C89_contig_31_848
Type: pfam
Location: 1106936 - 1108183 (+)
Type: pfam
Location: 1106936 - 1108183 (+)
Gene ID: C89_contig_31_849
Type: pfam
Location: 1108503 - 1111964 (-)
Type: pfam
Location: 1108503 - 1111964 (-)
Gene ID: C89_contig_31_850
Type: TC
Location: 1112060 - 1113100 (-)
Type: TC
Location: 1112060 - 1113100 (-)
Gene ID: C89_contig_31_851
Type: TC
Location: 1113308 - 1114102 (-)
Type: TC
Location: 1113308 - 1114102 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides fragilis
Gene Composition
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