Cluster: PUL0111_HRGMv2_4190_C19
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate: galactan
- Genome ID: HRGMv2_4190
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | PUL0111_HRGMv2_4190_C19 | HRGMv2_4190_90_3 | 1695 | 3125 | - | 2.A.2.1.1 |
| CAZyme | PUL0111_HRGMv2_4190_C19 | HRGMv2_4190_90_4 | 3211 | 4563 | - | GH4 |
| TF | PUL0111_HRGMv2_4190_C19 | HRGMv2_4190_90_5 | 4836 | 5768 | + | HTH_AraC | HTH_AraC |
Gene ID: HRGMv2_4190_90_3
Type: TC
Location: 1695 - 3125 (-)
Type: TC
Location: 1695 - 3125 (-)
Gene ID: HRGMv2_4190_90_4
Type: CAZyme
Location: 3211 - 4563 (-)
Type: CAZyme
Location: 3211 - 4563 (-)
Gene ID: HRGMv2_4190_90_5
Type: TF
Location: 4836 - 5768 (+)
Type: TF
Location: 4836 - 5768 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shimwellia
Gene Composition
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