Cluster: PUL0101_HRGMv2_0148_C1
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 3
- Substrate: host glycan
- Genome ID: HRGMv2_0148
- CGC Family ID: CGCFAM_01071
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0101_HRGMv2_0148_C1 | HRGMv2_0148_129_12 | 24689 | 26794 | - | GH97 |
| CAZyme | PUL0101_HRGMv2_0148_C1 | HRGMv2_0148_129_14 | 27769 | 30120 | - | GH115 |
| CAZyme | PUL0101_HRGMv2_0148_C1 | HRGMv2_0148_129_16 | 30836 | 33304 | + | GH3 |
| pfam | PUL0101_HRGMv2_0148_C1 | HRGMv2_0148_129_17 | 33315 | 34364 | + | NAD_synthase | tRNA_Me_trans | QueC | tRNA_Me_trans_C | tRNA_Me_trans_M |
| pfam | PUL0101_HRGMv2_0148_C1 | HRGMv2_0148_129_18 | 34365 | 35861 | - | DUF3843 |
| peptidase | PUL0101_HRGMv2_0148_C1 | HRGMv2_0148_129_19 | 36143 | 37384 | - | U32.001 |
| pfam | PUL0101_HRGMv2_0148_C1 | HRGMv2_0148_129_20 | 37482 | 38489 | + | Dus |
| pfam | PUL0101_HRGMv2_0148_C1 | HRGMv2_0148_129_21 | 38505 | 39485 | - | PAP2 | PAP2_3 |
| pfam | PUL0101_HRGMv2_0148_C1 | HRGMv2_0148_129_22 | 39476 | 40486 | - | adh_short | 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd |
| TC | PUL0101_HRGMv2_0148_C1 | HRGMv2_0148_129_23 | 40491 | 41393 | - | 2.A.4.7.2 |
| pfam | PUL0101_HRGMv2_0148_C1 | HRGMv2_0148_129_24 | 41542 | 43692 | + | S1 | RNB | OB_RNB | OB_Dis3 | CSD2 |
| NULL(UNKNOWN) | PUL0101_HRGMv2_0148_C1 | HRGMv2_0148_129_26 | 43991 | 44896 | + | NULL(UNKNOWN) |
| pfam | PUL0101_HRGMv2_0148_C1 | HRGMv2_0148_129_27 | 45117 | 46271 | - | Fe-ADH | Fe-ADH_2 | ADH_Fe_C |
| pfam | PUL0101_HRGMv2_0148_C1 | HRGMv2_0148_129_28 | 46304 | 47113 | - | Aldolase_II |
| TC | PUL0101_HRGMv2_0148_C1 | HRGMv2_0148_129_29 | 47140 | 48150 | - | 2.A.7.6.1 |
| pfam | PUL0101_HRGMv2_0148_C1 | HRGMv2_0148_129_30 | 48216 | 49469 | - | RhaA |
| pfam | PUL0101_HRGMv2_0148_C1 | HRGMv2_0148_129_31 | 49476 | 50954 | - | FGGY_N | FGGY_C |
| TF | PUL0101_HRGMv2_0148_C1 | HRGMv2_0148_129_32 | 51117 | 52010 | + | HTH_AraC | HTH_AraC |
Gene ID: HRGMv2_0148_129_12
Type: CAZyme
Location: 24689 - 26794 (-)
Type: CAZyme
Location: 24689 - 26794 (-)
Gene ID: HRGMv2_0148_129_14
Type: CAZyme
Location: 27769 - 30120 (-)
Type: CAZyme
Location: 27769 - 30120 (-)
Gene ID: HRGMv2_0148_129_16
Type: CAZyme
Location: 30836 - 33304 (+)
Type: CAZyme
Location: 30836 - 33304 (+)
Gene ID: HRGMv2_0148_129_17
Type: pfam
Location: 33315 - 34364 (+)
Type: pfam
Location: 33315 - 34364 (+)
Gene ID: HRGMv2_0148_129_18
Type: pfam
Location: 34365 - 35861 (-)
Type: pfam
Location: 34365 - 35861 (-)
Gene ID: HRGMv2_0148_129_19
Type: peptidase
Location: 36143 - 37384 (-)
Type: peptidase
Location: 36143 - 37384 (-)
Gene ID: HRGMv2_0148_129_20
Type: pfam
Location: 37482 - 38489 (+)
Type: pfam
Location: 37482 - 38489 (+)
Gene ID: HRGMv2_0148_129_21
Type: pfam
Location: 38505 - 39485 (-)
Type: pfam
Location: 38505 - 39485 (-)
Gene ID: HRGMv2_0148_129_22
Type: pfam
Location: 39476 - 40486 (-)
Type: pfam
Location: 39476 - 40486 (-)
Gene ID: HRGMv2_0148_129_23
Type: TC
Location: 40491 - 41393 (-)
Type: TC
Location: 40491 - 41393 (-)
Gene ID: HRGMv2_0148_129_24
Type: pfam
Location: 41542 - 43692 (+)
Type: pfam
Location: 41542 - 43692 (+)
Gene ID: HRGMv2_0148_129_26
Type: null
Location: 43991 - 44896 (+)
Type: null
Location: 43991 - 44896 (+)
Gene ID: HRGMv2_0148_129_27
Type: pfam
Location: 45117 - 46271 (-)
Type: pfam
Location: 45117 - 46271 (-)
Gene ID: HRGMv2_0148_129_28
Type: pfam
Location: 46304 - 47113 (-)
Type: pfam
Location: 46304 - 47113 (-)
Gene ID: HRGMv2_0148_129_29
Type: TC
Location: 47140 - 48150 (-)
Type: TC
Location: 47140 - 48150 (-)
Gene ID: HRGMv2_0148_129_30
Type: pfam
Location: 48216 - 49469 (-)
Type: pfam
Location: 48216 - 49469 (-)
Gene ID: HRGMv2_0148_129_31
Type: pfam
Location: 49476 - 50954 (-)
Type: pfam
Location: 49476 - 50954 (-)
Gene ID: HRGMv2_0148_129_32
Type: TF
Location: 51117 - 52010 (+)
Type: TF
Location: 51117 - 52010 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola plebeius
Gene Composition
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