Cluster: PUL0097_Rep_450_C1
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 10
- Substrate: host glycan
- Genome ID: Rep_450
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | PUL0097_Rep_450_C1 | Rep_450_c_0_717 | 873879 | 877136 | + | 1.B.14.6.1 |
| TC | PUL0097_Rep_450_C1 | Rep_450_c_0_718 | 877167 | 878681 | + | 8.A.46.1.4 |
| CAZyme | PUL0097_Rep_450_C1 | Rep_450_c_0_719 | 878809 | 880449 | + | CBM93 | GH33 |
| CAZyme | PUL0097_Rep_450_C1 | Rep_450_c_0_720 | 880480 | 882459 | + | GH20 |
| CAZyme | PUL0097_Rep_450_C1 | Rep_450_c_0_721 | 882461 | 883126 | + | CE3 |
| CAZyme | PUL0097_Rep_450_C1 | Rep_450_c_0_722 | 883123 | 885192 | + | CE20 | CE3 |
| CAZyme | PUL0097_Rep_450_C1 | Rep_450_c_0_723 | 885245 | 887845 | + | GH2 |
| CAZyme | PUL0097_Rep_450_C1 | Rep_450_c_0_724 | 887861 | 890185 | + | GH20 |
| pfam | PUL0097_Rep_450_C1 | Rep_450_c_0_725 | 890202 | 891341 | + | Kelch_1 | Kelch_2 | Kelch_6 | Kelch_KLHDC2_KLHL20_DRC7 | NANM | NANM |
| CAZyme | PUL0097_Rep_450_C1 | Rep_450_c_0_726 | 891338 | 893398 | + | GH20 |
| CAZyme | PUL0097_Rep_450_C1 | Rep_450_c_0_727 | 893405 | 895657 | + | GH92 |
| CAZyme | PUL0097_Rep_450_C1 | Rep_450_c_0_728 | 895666 | 898170 | + | GH2 |
| CAZyme | PUL0097_Rep_450_C1 | Rep_450_c_0_729 | 898349 | 899512 | + | CE9 |
| TC | PUL0097_Rep_450_C1 | Rep_450_c_0_730 | 899736 | 900389 | - | 3.A.1.128.2 |
| NULL(UNKNOWN) | PUL0097_Rep_450_C1 | Rep_450_c_0_731 | 900386 | 901315 | - | NULL(UNKNOWN) |
Gene ID: Rep_450_c_0_717
Type: TC
Location: 873879 - 877136 (+)
Type: TC
Location: 873879 - 877136 (+)
Gene ID: Rep_450_c_0_718
Type: TC
Location: 877167 - 878681 (+)
Type: TC
Location: 877167 - 878681 (+)
Gene ID: Rep_450_c_0_719
Type: CAZyme
Location: 878809 - 880449 (+)
Type: CAZyme
Location: 878809 - 880449 (+)
Gene ID: Rep_450_c_0_720
Type: CAZyme
Location: 880480 - 882459 (+)
Type: CAZyme
Location: 880480 - 882459 (+)
Gene ID: Rep_450_c_0_721
Type: CAZyme
Location: 882461 - 883126 (+)
Type: CAZyme
Location: 882461 - 883126 (+)
Gene ID: Rep_450_c_0_722
Type: CAZyme
Location: 883123 - 885192 (+)
Type: CAZyme
Location: 883123 - 885192 (+)
Gene ID: Rep_450_c_0_723
Type: CAZyme
Location: 885245 - 887845 (+)
Type: CAZyme
Location: 885245 - 887845 (+)
Gene ID: Rep_450_c_0_724
Type: CAZyme
Location: 887861 - 890185 (+)
Type: CAZyme
Location: 887861 - 890185 (+)
Gene ID: Rep_450_c_0_725
Type: pfam
Location: 890202 - 891341 (+)
Type: pfam
Location: 890202 - 891341 (+)
Gene ID: Rep_450_c_0_726
Type: CAZyme
Location: 891338 - 893398 (+)
Type: CAZyme
Location: 891338 - 893398 (+)
Gene ID: Rep_450_c_0_727
Type: CAZyme
Location: 893405 - 895657 (+)
Type: CAZyme
Location: 893405 - 895657 (+)
Gene ID: Rep_450_c_0_728
Type: CAZyme
Location: 895666 - 898170 (+)
Type: CAZyme
Location: 895666 - 898170 (+)
Gene ID: Rep_450_c_0_729
Type: CAZyme
Location: 898349 - 899512 (+)
Type: CAZyme
Location: 898349 - 899512 (+)
Gene ID: Rep_450_c_0_730
Type: TC
Location: 899736 - 900389 (-)
Type: TC
Location: 899736 - 900389 (-)
Gene ID: Rep_450_c_0_731
Type: null
Location: 900386 - 901315 (-)
Type: null
Location: 900386 - 901315 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola massiliensis
Gene Composition
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