Cluster: PUL0037_HRGMv2_2532_C1
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate: galactan
- Genome ID: HRGMv2_2532
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TF | PUL0037_HRGMv2_2532_C1 | HRGMv2_2532_33_1 | 247 | 1185 | - | HTH_11 |
| TF | PUL0037_HRGMv2_2532_C1 | HRGMv2_2532_33_2 | 1182 | 2042 | - | HTH_AraC | HTH_AraC |
| CAZyme | PUL0037_HRGMv2_2532_C1 | HRGMv2_2532_33_3 | 2150 | 4312 | + | GH36 |
| TC | PUL0037_HRGMv2_2532_C1 | HRGMv2_2532_33_4 | 4347 | 5606 | + | 3.A.1.1.28 |
| TC | PUL0037_HRGMv2_2532_C1 | HRGMv2_2532_33_5 | 5620 | 6486 | + | 3.A.1.1.28 |
| TC | PUL0037_HRGMv2_2532_C1 | HRGMv2_2532_33_6 | 6500 | 7333 | + | 3.A.1.1.28 |
| CAZyme | PUL0037_HRGMv2_2532_C1 | HRGMv2_2532_33_7 | 7574 | 9016 | + | GH13_18 |
| TC | PUL0037_HRGMv2_2532_C1 | HRGMv2_2532_33_8 | 9154 | 10347 | + | 9.B.67.1.2 |
Gene ID: HRGMv2_2532_33_1
Type: TF
Location: 247 - 1185 (-)
Type: TF
Location: 247 - 1185 (-)
Gene ID: HRGMv2_2532_33_2
Type: TF
Location: 1182 - 2042 (-)
Type: TF
Location: 1182 - 2042 (-)
Gene ID: HRGMv2_2532_33_3
Type: CAZyme
Location: 2150 - 4312 (+)
Type: CAZyme
Location: 2150 - 4312 (+)
Gene ID: HRGMv2_2532_33_4
Type: TC
Location: 4347 - 5606 (+)
Type: TC
Location: 4347 - 5606 (+)
Gene ID: HRGMv2_2532_33_5
Type: TC
Location: 5620 - 6486 (+)
Type: TC
Location: 5620 - 6486 (+)
Gene ID: HRGMv2_2532_33_6
Type: TC
Location: 6500 - 7333 (+)
Type: TC
Location: 6500 - 7333 (+)
Gene ID: HRGMv2_2532_33_7
Type: CAZyme
Location: 7574 - 9016 (+)
Type: CAZyme
Location: 7574 - 9016 (+)
Gene ID: HRGMv2_2532_33_8
Type: TC
Location: 9154 - 10347 (+)
Type: TC
Location: 9154 - 10347 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus pseudopneumoniae_E
Gene Composition
Loading chart...
← Back to Cluster List