Cluster: PUL0021_CGMR087432_C0
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 2
- Substrate: host glycan
- Genome ID: CGMR087432
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| NULL(UNKNOWN) | PUL0021_CGMR087432_C0 | k141_58846_11 | 13835 | 15799 | + | NULL(UNKNOWN) |
| STP | PUL0021_CGMR087432_C0 | k141_58846_12 | 15957 | 16646 | + | DeoRC |
| pfam | PUL0021_CGMR087432_C0 | k141_58846_13 | 16715 | 17359 | + | DNA_alkylation |
| STP | PUL0021_CGMR087432_C0 | k141_58846_14 | 17462 | 18481 | - | PfkB |
| STP | PUL0021_CGMR087432_C0 | k141_58846_16 | 19250 | 20074 | - | CHASE2 |
| pfam | PUL0021_CGMR087432_C0 | k141_58846_17 | 20109 | 20954 | - | KduI |
| TF | PUL0021_CGMR087432_C0 | k141_58846_18 | 21216 | 21983 | - | MarR |
| NULL(UNKNOWN) | PUL0021_CGMR087432_C0 | k141_58846_19 | 22197 | 23027 | + | NULL(UNKNOWN) |
| CAZyme | PUL0021_CGMR087432_C0 | k141_58846_20 | 23024 | 24202 | + | GH88 |
| TC | PUL0021_CGMR087432_C0 | k141_58846_21 | 24302 | 24802 | + | 4.A.6.1.14 |
| TC | PUL0021_CGMR087432_C0 | k141_58846_22 | 24955 | 25767 | + | 4.A.6.1.14 |
| TC | PUL0021_CGMR087432_C0 | k141_58846_23 | 25757 | 26572 | + | 4.A.6.1.14 |
| pfam | PUL0021_CGMR087432_C0 | k141_58846_24 | 26692 | 27162 | + | EIIA-man |
| pfam | PUL0021_CGMR087432_C0 | k141_58846_25 | 27162 | 27509 | + | YajC |
| CAZyme | PUL0021_CGMR087432_C0 | k141_58846_26 | 27448 | 29373 | + | PL12_1 |
| NULL(UNKNOWN) | PUL0021_CGMR087432_C0 | k141_58846_27 | 29443 | 30426 | + | NULL(UNKNOWN) |
Gene ID: k141_58846_11
Type: null
Location: 13835 - 15799 (+)
Type: null
Location: 13835 - 15799 (+)
Gene ID: k141_58846_12
Type: STP
Location: 15957 - 16646 (+)
Type: STP
Location: 15957 - 16646 (+)
Gene ID: k141_58846_13
Type: pfam
Location: 16715 - 17359 (+)
Type: pfam
Location: 16715 - 17359 (+)
Gene ID: k141_58846_14
Type: STP
Location: 17462 - 18481 (-)
Type: STP
Location: 17462 - 18481 (-)
Gene ID: k141_58846_16
Type: STP
Location: 19250 - 20074 (-)
Type: STP
Location: 19250 - 20074 (-)
Gene ID: k141_58846_17
Type: pfam
Location: 20109 - 20954 (-)
Type: pfam
Location: 20109 - 20954 (-)
Gene ID: k141_58846_18
Type: TF
Location: 21216 - 21983 (-)
Type: TF
Location: 21216 - 21983 (-)
Gene ID: k141_58846_19
Type: null
Location: 22197 - 23027 (+)
Type: null
Location: 22197 - 23027 (+)
Gene ID: k141_58846_20
Type: CAZyme
Location: 23024 - 24202 (+)
Type: CAZyme
Location: 23024 - 24202 (+)
Gene ID: k141_58846_21
Type: TC
Location: 24302 - 24802 (+)
Type: TC
Location: 24302 - 24802 (+)
Gene ID: k141_58846_22
Type: TC
Location: 24955 - 25767 (+)
Type: TC
Location: 24955 - 25767 (+)
Gene ID: k141_58846_23
Type: TC
Location: 25757 - 26572 (+)
Type: TC
Location: 25757 - 26572 (+)
Gene ID: k141_58846_24
Type: pfam
Location: 26692 - 27162 (+)
Type: pfam
Location: 26692 - 27162 (+)
Gene ID: k141_58846_25
Type: pfam
Location: 27162 - 27509 (+)
Type: pfam
Location: 27162 - 27509 (+)
Gene ID: k141_58846_26
Type: CAZyme
Location: 27448 - 29373 (+)
Type: CAZyme
Location: 27448 - 29373 (+)
Gene ID: k141_58846_27
Type: null
Location: 29443 - 30426 (+)
Type: null
Location: 29443 - 30426 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lacticaseibacillus
Species
Lacticaseibacillus paracasei
Gene Composition
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