Cluster: PUL0018_HRGMv2_2498_C0
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 3
- Substrate: host glycan
- Genome ID: HRGMv2_2498
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0018_HRGMv2_2498_C0 | HRGMv2_2498_1_90 | 65730 | 68933 | + | CBM70 | PL8_1 |
| pfam | PUL0018_HRGMv2_2498_C0 | HRGMv2_2498_1_91 | 69060 | 69689 | - | Aldolase |
| STP | PUL0018_HRGMv2_2498_C0 | HRGMv2_2498_1_92 | 69699 | 70700 | - | PfkB |
| pfam | PUL0018_HRGMv2_2498_C0 | HRGMv2_2498_1_93 | 70731 | 71372 | - | LacAB_rpiB | DUF3666 |
| sulfatase | PUL0018_HRGMv2_2498_C0 | HRGMv2_2498_1_94 | 71391 | 72206 | - | S1_2 |
| TC | PUL0018_HRGMv2_2498_C0 | HRGMv2_2498_1_95 | 72459 | 72893 | + | 4.A.6.1.14 |
| CAZyme | PUL0018_HRGMv2_2498_C0 | HRGMv2_2498_1_96 | 72905 | 74095 | + | GH88 |
| TC | PUL0018_HRGMv2_2498_C0 | HRGMv2_2498_1_97 | 74106 | 74597 | + | 4.A.6.1.14 |
| TC | PUL0018_HRGMv2_2498_C0 | HRGMv2_2498_1_98 | 74612 | 75391 | + | 4.A.6.1.14 |
| TC | PUL0018_HRGMv2_2498_C0 | HRGMv2_2498_1_99 | 75378 | 76196 | + | 4.A.6.1.14 |
| pfam | PUL0018_HRGMv2_2498_C0 | HRGMv2_2498_1_100 | 76196 | 76489 | + | YajC |
| CAZyme | PUL0018_HRGMv2_2498_C0 | HRGMv2_2498_1_101 | 76511 | 78412 | + | PL12_1 |
| TF | PUL0018_HRGMv2_2498_C0 | HRGMv2_2498_1_102 | 78472 | 79476 | + | LacI |
Gene ID: HRGMv2_2498_1_90
Type: CAZyme
Location: 65730 - 68933 (+)
Type: CAZyme
Location: 65730 - 68933 (+)
Gene ID: HRGMv2_2498_1_91
Type: pfam
Location: 69060 - 69689 (-)
Type: pfam
Location: 69060 - 69689 (-)
Gene ID: HRGMv2_2498_1_92
Type: STP
Location: 69699 - 70700 (-)
Type: STP
Location: 69699 - 70700 (-)
Gene ID: HRGMv2_2498_1_93
Type: pfam
Location: 70731 - 71372 (-)
Type: pfam
Location: 70731 - 71372 (-)
Gene ID: HRGMv2_2498_1_94
Type: sulfatase
Location: 71391 - 72206 (-)
Type: sulfatase
Location: 71391 - 72206 (-)
Gene ID: HRGMv2_2498_1_95
Type: TC
Location: 72459 - 72893 (+)
Type: TC
Location: 72459 - 72893 (+)
Gene ID: HRGMv2_2498_1_96
Type: CAZyme
Location: 72905 - 74095 (+)
Type: CAZyme
Location: 72905 - 74095 (+)
Gene ID: HRGMv2_2498_1_97
Type: TC
Location: 74106 - 74597 (+)
Type: TC
Location: 74106 - 74597 (+)
Gene ID: HRGMv2_2498_1_98
Type: TC
Location: 74612 - 75391 (+)
Type: TC
Location: 74612 - 75391 (+)
Gene ID: HRGMv2_2498_1_99
Type: TC
Location: 75378 - 76196 (+)
Type: TC
Location: 75378 - 76196 (+)
Gene ID: HRGMv2_2498_1_100
Type: pfam
Location: 76196 - 76489 (+)
Type: pfam
Location: 76196 - 76489 (+)
Gene ID: HRGMv2_2498_1_101
Type: CAZyme
Location: 76511 - 78412 (+)
Type: CAZyme
Location: 76511 - 78412 (+)
Gene ID: HRGMv2_2498_1_102
Type: TF
Location: 78472 - 79476 (+)
Type: TF
Location: 78472 - 79476 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Gene Composition
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