Cluster: PUL0012_Rep_790_C0
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate: chitin
- Genome ID: Rep_790
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| pfam | PUL0012_Rep_790_C0 | Rep_790_c_8_56 | 61173 | 62585 | - | PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| CAZyme | PUL0012_Rep_790_C0 | Rep_790_c_8_57 | 62708 | 65113 | - | GH94 |
| CAZyme | PUL0012_Rep_790_C0 | Rep_790_c_8_58 | 65232 | 67145 | - | GH20 |
| pfam | PUL0012_Rep_790_C0 | Rep_790_c_8_59 | 67142 | 68026 | - | BcrAD_BadFG |
| CAZyme | PUL0012_Rep_790_C0 | Rep_790_c_8_60 | 68023 | 69747 | - | GH9 |
| TC | PUL0012_Rep_790_C0 | Rep_790_c_8_61 | 69804 | 70799 | - | 3.A.1.5.20 |
| TC | PUL0012_Rep_790_C0 | Rep_790_c_8_62 | 70842 | 71825 | - | 3.A.1.5.15 |
| TC | PUL0012_Rep_790_C0 | Rep_790_c_8_63 | 71828 | 72853 | - | 3.A.1.5.14 |
| TC | PUL0012_Rep_790_C0 | Rep_790_c_8_64 | 72856 | 73842 | - | 3.A.1.5.16 |
| TC | PUL0012_Rep_790_C0 | Rep_790_c_8_65 | 74012 | 75682 | - | 3.A.1.5.7 |
| STP | PUL0012_Rep_790_C0 | Rep_790_c_8_66 | 76593 | 79982 | - | HATPase_c | HisKA | PAS | Response_reg |
Gene ID: Rep_790_c_8_56
Type: pfam
Location: 61173 - 62585 (-)
Type: pfam
Location: 61173 - 62585 (-)
Gene ID: Rep_790_c_8_57
Type: CAZyme
Location: 62708 - 65113 (-)
Type: CAZyme
Location: 62708 - 65113 (-)
Gene ID: Rep_790_c_8_58
Type: CAZyme
Location: 65232 - 67145 (-)
Type: CAZyme
Location: 65232 - 67145 (-)
Gene ID: Rep_790_c_8_59
Type: pfam
Location: 67142 - 68026 (-)
Type: pfam
Location: 67142 - 68026 (-)
Gene ID: Rep_790_c_8_60
Type: CAZyme
Location: 68023 - 69747 (-)
Type: CAZyme
Location: 68023 - 69747 (-)
Gene ID: Rep_790_c_8_61
Type: TC
Location: 69804 - 70799 (-)
Type: TC
Location: 69804 - 70799 (-)
Gene ID: Rep_790_c_8_62
Type: TC
Location: 70842 - 71825 (-)
Type: TC
Location: 70842 - 71825 (-)
Gene ID: Rep_790_c_8_63
Type: TC
Location: 71828 - 72853 (-)
Type: TC
Location: 71828 - 72853 (-)
Gene ID: Rep_790_c_8_64
Type: TC
Location: 72856 - 73842 (-)
Type: TC
Location: 72856 - 73842 (-)
Gene ID: Rep_790_c_8_65
Type: TC
Location: 74012 - 75682 (-)
Type: TC
Location: 74012 - 75682 (-)
Gene ID: Rep_790_c_8_66
Type: STP
Location: 76593 - 79982 (-)
Type: STP
Location: 76593 - 79982 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Vibrionaceae
Genus
Vibrio
Species
Vibrio cholerae
Gene Composition
Loading chart...
← Back to Cluster List