Cluster: PUL0001_B65.bin_10_C1
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 7
- Substrate: beta-mannan
- Genome ID: B65.bin_10
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0001_B65.bin_10_C1 | B65_contig_437_95 | 94662 | 95597 | + | GH113 |
| pfam | PUL0001_B65.bin_10_C1 | B65_contig_437_96 | 95729 | 97447 | + | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| CAZyme | PUL0001_B65.bin_10_C1 | B65_contig_437_97 | 97464 | 99653 | + | GH36 |
| TF | PUL0001_B65.bin_10_C1 | B65_contig_437_98 | 99696 | 100721 | + | LacI |
| STP | PUL0001_B65.bin_10_C1 | B65_contig_437_99 | 102138 | 103607 | + | SBP_bac_1 |
| TC | PUL0001_B65.bin_10_C1 | B65_contig_437_100 | 103679 | 104683 | + | 3.A.1.1.23 |
| TC | PUL0001_B65.bin_10_C1 | B65_contig_437_101 | 104688 | 105563 | + | 3.A.1.1.27 |
| pfam | PUL0001_B65.bin_10_C1 | B65_contig_437_102 | 105585 | 106814 | + | GlcNAc_2-epim |
| CAZyme | PUL0001_B65.bin_10_C1 | B65_contig_437_103 | 106858 | 108036 | + | GH130_1 |
| CAZyme | PUL0001_B65.bin_10_C1 | B65_contig_437_104 | 108160 | 109182 | + | GH130_2 |
| CAZyme | PUL0001_B65.bin_10_C1 | B65_contig_437_105 | 109384 | 110430 | + | CE2 |
| CAZyme | PUL0001_B65.bin_10_C1 | B65_contig_437_106 | 110447 | 111565 | + | CBM35inCE17 | CE17 |
| CAZyme | PUL0001_B65.bin_10_C1 | B65_contig_437_107 | 111590 | 113896 | + | GH1 |
Gene ID: B65_contig_437_95
Type: CAZyme
Location: 94662 - 95597 (+)
Type: CAZyme
Location: 94662 - 95597 (+)
Gene ID: B65_contig_437_96
Type: pfam
Location: 95729 - 97447 (+)
Type: pfam
Location: 95729 - 97447 (+)
Gene ID: B65_contig_437_97
Type: CAZyme
Location: 97464 - 99653 (+)
Type: CAZyme
Location: 97464 - 99653 (+)
Gene ID: B65_contig_437_98
Type: TF
Location: 99696 - 100721 (+)
Type: TF
Location: 99696 - 100721 (+)
Gene ID: B65_contig_437_99
Type: STP
Location: 102138 - 103607 (+)
Type: STP
Location: 102138 - 103607 (+)
Gene ID: B65_contig_437_100
Type: TC
Location: 103679 - 104683 (+)
Type: TC
Location: 103679 - 104683 (+)
Gene ID: B65_contig_437_101
Type: TC
Location: 104688 - 105563 (+)
Type: TC
Location: 104688 - 105563 (+)
Gene ID: B65_contig_437_102
Type: pfam
Location: 105585 - 106814 (+)
Type: pfam
Location: 105585 - 106814 (+)
Gene ID: B65_contig_437_103
Type: CAZyme
Location: 106858 - 108036 (+)
Type: CAZyme
Location: 106858 - 108036 (+)
Gene ID: B65_contig_437_104
Type: CAZyme
Location: 108160 - 109182 (+)
Type: CAZyme
Location: 108160 - 109182 (+)
Gene ID: B65_contig_437_105
Type: CAZyme
Location: 109384 - 110430 (+)
Type: CAZyme
Location: 109384 - 110430 (+)
Gene ID: B65_contig_437_106
Type: CAZyme
Location: 110447 - 111565 (+)
Type: CAZyme
Location: 110447 - 111565 (+)
Gene ID: B65_contig_437_107
Type: CAZyme
Location: 111590 - 113896 (+)
Type: CAZyme
Location: 111590 - 113896 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia intestinalis
Gene Composition
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